Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1056 ATGGCCACCGTGACCACCCAAGCCTCCGCCGCGATTTTCCGGCCATGTGCTTCGAAGTCGAGGTTTCTTACCGGGTCTTCCGGTAAACTCAACCGGGAAGTGAGTATGAGGCCAATGGGGTGCCCTCCTTCTGCTTCTTTCAAGGTTGAAGCCAAGAAGGGAGAGTGGTTACCAGGCTTGGCCTCCCCAACTTACCTCGATGGCACTCTTCCCGGTGACAACGGGTTTGACCCTCTGGGGCTAGCCGAGGACCCAGAGAACCTGAGGTGGTACGTGCAAGCCGAGCTTGTGAACGGACGTTGGGCCATGTTGGGTGTTGCAGGAATGCTGCTCCCAGAGGTATTCACCAAGATTGGAATCATCAATGCACCGCAATGGTTCGATGCAGGGAAATCAGAGTACTTTGCATCCTACTCAACCCTCTTTGTGATCGAGTTCATTCTCTTCCACTACGTGGAGATCCGGAGATGGCAGGACATCAAGGAGCCTGGCTGTGTCAACCAAGACCCCATCTTCAAGCAGTACAGCTTGCCTGCACATGAGTGTGGCTACCCTGGCAGTGTCTTCAACCCCTTGAACTTTGCTCCTACTTTGGAGGCCAAGGAGAAGGAACTTGCCAATGGGAGATTGGCTATGTTGGCATTCTTGGGATTCATAGTTCAACACAACGTGACAGGAAAAGGACCATTTGAGAACCTCTTGCAGCACATCAATGACCCATGGCACAACACCATCATCAATACAATTCGTGGCTACTAA 759 0.5244 MATVTTQASAAIFRPCASKSRFLTGSSGKLNREVSMRPMGCPPSASFKVEAKKGEWLPGLASPTYLDGTLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTKIGIINAPQWFDAGKSEYFASYSTLFVIEFILFHYVEIRRWQDIKEPGCVNQDPIFKQYSLPAHECGYPGSVFNPLNFAPTLEAKEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHINDPWHNTIINTIRGY 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1056 252 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 1 252 - -
Aed10g1056 252 SUPERFAMILY Chlorophyll a-b binding protein 53 249 - -
Aed10g1056 252 Pfam Chlorophyll A-B binding protein 63 222 IPR022796 -
Aed10g1056 252 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 252 IPR001344 GO:0009765|GO:0016020
Aed10g1056 252 Gene3D Chlorophyll a/b binding protein domain 63 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1056 Aed-Chr10 9379222 9382149 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1056 43 245 Chloroplast and Mitochondria Gene Families AT3G61470 51.415 7.31e-72 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1056 K08910 - gmx:100802922 509.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g1056 10 9379222 9382149 Aed10g1056 10 9379222 9382149 ECH