Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1022 ATGGAGTTTGGTTCTGAATTAAGATCTGGTCATGAAGTCAAGGATGAGAAGAGAAGTGAATCTAGTGTTGGCGATGATGATGATCGTCGTGAACAAGAGATTGTTACGAAGGAGCCACCCCTTTCTACTACCGAAAGATCCACGGTGGAGGTTGGGCCAAATGCTTCTTCCCTAACCAAAAAGGAAGAGGTCTTTTTTTTTTTTTCTGTGGAGTCTCTTCTAGGTCTCTATTTCTTCAAAGTAAAGATTAACATAAACCTGATGCATGGATGGTTGCAGGTTGTTGATGAACTTGAAACTGCCAAAGCCGAAATGGGTGAAGTGATGGAAGAAAACCAACGACTAAAGACGAGTTTGAACCGGATACTAACCGATTACCGCACACTCCAAATGCAATTCCACAACATAGTTGAACAAGAGACAACAAAAGATTCTTCTGAGAAAGTGAAAAACAACAACAATGCCAATGGCCATGATCAAGAAATGTTAATAGAGGAATCAGAATTAGTTTCCCTCAGTCTTGGAAGACTTCCAACAAGAAACAATGTTCAGAAAGCTAATAATAACAAATTCTCTAATAATAAAGCATTGAAAGAGGAAGAAGGAGACCACAAAGAAGGCTTGTCCCTTGGATTGGACTGCAAGTTTGAGACATCAAAATCTGGAAGCACAACTGAACATATGCCAACAAATATTCATCAAAGCCCTAATAACAGTGTTGAAGAAGTTCCACCAAAGGAAATAGAAGCAGCTGGGGAGAGTTGGCCACCTGGCAAGGGAAACAAGCATCCTAGAGACACTACAACTACTACTACCACTGGTGGAGAGGATGAAGTTTCTCAACAAAACCCAGCAAAAAAACCAAGAGTTTGTGTGAGAGCAAGATGTGACACCCCAACTATGAATGATGGATGTCAATGGAGGAAGTATGGACAGAAGATTTCAAAGGGAAACCCTTGCCCTCGAGCTTACTATCGTTGCACAGTTGCACCATCATGCCCCGTAAGAAAGCAGGTGCAGAGATGTGCTCAAGACATGACCATATTAATCACCTCCTACGAAGGGAACCACAACCACCCTCTTCCACTCTCAGCCACAGCCATGGCCTCCACCACCTCTGCAGCCGCCTCCATGCTATTATCCGGCTCATCAACCTCCGGAACAAGACCTTCCACTGCAGCAAATCTTCATGGAATGAATTTCTTCCTATCAGACGGTTCCAAATCAAAGCAATACTACCTCTCCCACCCTGCACTCTCATCTTCACCTTCACACCCTACCATCACTCTAGACCTCACTTCCAATAATACTCCATCTTCTTCTACTTCCCCTCTTGTTAAATTCACTTCAAACTCAAACTACAACATTAACGCACAAAGCCGGTACCCTAGTCCTTCTTCCACAACAAGTCTCAACTTCAGTTCCTCAGAATCTTGGAGCAATAATGGATTCTTCACCTACAACAACAACAATAGGAATAATGTTAATGTTCTTAGCAACATAAACATTGGAAGACGACAACAACAACAACAACCAATGGAAAACATCTACAGCTCCTTCCTGCAAAGGAACAACAACAACAACAATGTTGTTCCAAACCCTCCACTACCACAGCATTCTCTGCCAGACACCATAGCTGCAGCAACAAAAGTGATCACAGCGGACCCTAATTTTCAATCAGCTTTGGCAGCAGCACTTACAACAATCATTGGCTCTGGAGGAGGAGGAGGAAGCACTACTACTCAAGGTGCTGGGGAAAATCTGAGTCAGAAAATGAAATGGAGTGAACTCTTTCCTTCATCTTCTTCAACAAAAGTCAATGGTTGTGCATCAAGCTTCTTGAACAAATGA 1851 0.4273 MEFGSELRSGHEVKDEKRSESSVGDDDDRREQEIVTKEPPLSTTERSTVEVGPNASSLTKKEEVFFFFSVESLLGLYFFKVKININLMHGWLQVVDELETAKAEMGEVMEENQRLKTSLNRILTDYRTLQMQFHNIVEQETTKDSSEKVKNNNNANGHDQEMLIEESELVSLSLGRLPTRNNVQKANNNKFSNNKALKEEEGDHKEGLSLGLDCKFETSKSGSTTEHMPTNIHQSPNNSVEEVPPKEIEAAGESWPPGKGNKHPRDTTTTTTTGGEDEVSQQNPAKKPRVCVRARCDTPTMNDGCQWRKYGQKISKGNPCPRAYYRCTVAPSCPVRKQVQRCAQDMTILITSYEGNHNHPLPLSATAMASTTSAAASMLLSGSSTSGTRPSTAANLHGMNFFLSDGSKSKQYYLSHPALSSSPSHPTITLDLTSNNTPSSSTSPLVKFTSNSNYNINAQSRYPSPSSTTSLNFSSSESWSNNGFFTYNNNNRNNVNVLSNINIGRRQQQQQPMENIYSSFLQRNNNNNNVVPNPPLPQHSLPDTIAAATKVITADPNFQSALAAALTTIIGSGGGGGSTTTQGAGENLSQKMKWSELFPSSSSTKVNGCASSFLNK 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1022 616 SUPERFAMILY WRKY DNA-binding domain 294 362 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed10g1022 616 MobiDBLite consensus disorder prediction 263 280 - -
Aed10g1022 616 Coils Coil 98 118 - -
Aed10g1022 616 MobiDBLite consensus disorder prediction 218 286 - -
Aed10g1022 616 SMART WRKY_cls 301 361 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed10g1022 616 Gene3D WRKY domain 286 363 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed10g1022 616 Pfam WRKY DNA -binding domain 302 360 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed10g1022 616 MobiDBLite consensus disorder prediction 37 54 - -
Aed10g1022 616 MobiDBLite consensus disorder prediction 218 241 - -
Aed10g1022 616 MobiDBLite consensus disorder prediction 139 158 - -
Aed10g1022 616 MobiDBLite consensus disorder prediction 1 36 - -
Aed10g1022 616 ProSiteProfiles WRKY domain profile. 296 362 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed10g1022 616 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 26 616 IPR044810 GO:0003700
Aed10g1022 616 MobiDBLite consensus disorder prediction 183 206 - -
Aed10g1022 616 MobiDBLite consensus disorder prediction 1 54 - -
Aed10g1022 616 PANTHER WRKY TRANSCRIPTION FACTOR 61-RELATED 26 616 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1022 Aed-Chr10 8973453 8977933 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1022 94 571 WRKY Transcription Factor Family AT1G18860 42.004 4.70e-80 260
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aed10g1022 WRKY 6.5e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1022 - - gmx:100804403 700.279
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g1022 10 8973453 8977933 Aed6g1552 6 19646721 19650871 ECH
Aed3g0415 3 2962195 2964595 Aed10g1022 10 8973453 8977933 ECH
Aed11g0320 11 2589173 2594924 Aed10g1022 10 8973453 8977933 ECH
Aed10g1022 10 8973453 8977933 Aed10g1022 10 8973453 8977933 ECH