Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1015 ATGCTACATTTTAAATCAGTTCTTGTTATGTTGTTAACCTATTTGGTCCTTGCACTAAGTGGTGGAAGGTTTATTGGGAATTTAGATCTTTGTGGGAGGCAAGTTCAGAAACCATGTCGGACATCACTTGGTTTCCCAGTGGTGCTACCACATGCTGAAATCCCTGCCAAAAGATCTTCACATTACGTGAAGTGGGTGCTAGTTGGTGCAATAACAATAATGGGACTTGCACTTGTTATAACTCTTTCCTTACTATGGATTTGTTTGCTATCAAAGAAGGAAAGAGCTGCTAAGAGATACATAGAAGTGAAGGATCAAGTCAATCCAGAATCAAGTAGGAAGGATGATGGTACAAAACTCATCACCTTCCACGGTGATCTTCCGTACCCGTCATTGGAGATCATAGAGAAGTTGGAGTCTCTTGATGAAGATGATGTGGTAGGGTCTGGAGGATTTGGAACTGTTTACAGGATGGTGATGAATGATTGTGGTACATTTGCAGTCAAGCGGATTGATAGAAGCCGTGATGGTTCTGATCAGGGGTTTGAAAGAGAACTAGAAATATTGGGTAGCATCAAGCACATTAATCTAGTTAACCTGCGCGATTTGGAATCTGTTGAAGTAATTCTTGAACTAGCAGCAAGTTGCACTGATGCAAACGCGGACGAACGTCCATCTATGAACCAAGTGTTGCAGATACTGGAACAAGAGGTTATGTCTCCATGCCCAAGATTCTGCATGATTATTTAA 750 0.4147 MLHFKSVLVMLLTYLVLALSGGRFIGNLDLCGRQVQKPCRTSLGFPVVLPHAEIPAKRSSHYVKWVLVGAITIMGLALVITLSLLWICLLSKKERAAKRYIEVKDQVNPESSRKDDGTKLITFHGDLPYPSLEIIEKLESLDEDDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSRDGSDQGFERELEILGSIKHINLVNLRDLESVEVILELAASCTDANADERPSMNQVLQILEQEVMSPCPRFCMII 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1015 249 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 23 204 - -
Aed10g1015 249 ProSitePatterns Protein kinases ATP-binding region signature. 147 169 IPR017441 GO:0005524
Aed10g1015 249 Pfam Protein kinase domain 143 203 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed10g1015 249 PANTHER REPEAT FAMILY PROTEIN, PUTATIVE, EXPRESSED-RELATED 209 244 - -
Aed10g1015 249 PANTHER REPEAT FAMILY PROTEIN, PUTATIVE, EXPRESSED-RELATED 23 204 - -
Aed10g1015 249 SUPERFAMILY Protein kinase-like (PK-like) 120 203 IPR011009 -
Aed10g1015 249 Gene3D Phosphorylase Kinase; domain 1 104 203 - -
Aed10g1015 249 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 209 244 - -
Aed10g1015 249 ProSiteProfiles Protein kinase domain profile. 141 249 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1015 Aed-Chr10 8918270 8921153 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1015 204 243 Receptor kinase-like Gene Family AT2G35620 50.000 1.18e-08 53.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Aed10g1015 Pkinase 2.2e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1015 - - gmx:100805042 341.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g1015 10 8918270 8921153 Aed10g1015 10 8918270 8921153 ECH