Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1013 ATGGGTGACAAGTCCCAAGTATTGGAGGCTGTGTTGAAGGAAGCTGTAGATTTGGAAAGCAAATTCTTGAAGTTCTTGGGGTTTATGTGGAATCCTCTGTCTTGGGTTATGGAGGCTGCTGCTATAATGGCAATTGCACTTGCAAATGGAGGGGGGAAGCCCCCTGACTGGCAAGATTTTGTTGGTATCATCACCTTGCTTGTCATCAATTCAACTATCAGTTTCATTGAGGAGAACAATGCTGGTAATGCTGCGGCAGCTCTCATGGCTCGCCTTGCTCCGAAAGCAAAGTCTTCTCTTACTGGTGAGTCCCTTCCGGTGACAAAGGGCCCTGGTGATGGAGTGTATTCTGGTTCTACCTGCAAACAAGGAGAGATTGAAGCTGTTGTCATTGCCACTGGCGTTCATACCTTCTTTGGGAAAGCTGCTCACCTTGTTGATACCACTAATCAAGTGGGACACTTTCAAAAGCGAGTGTTTGGAGTTTCTACTCTTGAGAAAACTGCTCATGATGATATCCGAAAACTGGCCTCTGCAATCTATCTTCAAGTGAGCACTGTTAGTCAGGCTTTAATATTTGTGACTCGGTCGCGGGGTTGGTCTTATGTTGAACGTCCTGGTATTTGGCTCGTGACAGCTTTCATCATTGCTCAGCTGATTGCCACTTTGATTGCAGTATATGCCAACTGGAGCTTTGCTGCCATTGAAGGCATAGGTTGGGGTTGGGCTGGTGTGATATGGTTATACAACATAATATTCTACATTCCACTTGACCCCATCAAGTTTTTAATTCGATATGTTTTGAGTGGAAGGGCTTGGGAGCTTGTCATTGAGCAAAGGATTGCATTCACAAGGCAAAAGGACTTTGGAAAGGAACAAAGGGAACTTCAATGGGCACATGCACAAAGAACATTGCATGGACTGCAGCCACCTGACACCAAGATGTTCACTGAGCGCACACATTTCAATGAACTCAATCAAATGGCTGAAGAAGCTAAAAGGAGAGCTGAAATTGCAAGGCTGCGAGAATTGCATACACTAAAGGGTCATGTAGAATCAGTTTTGAAACTGAAAGGGATTGATGTAGACACAATTCAGCAAGCATACACAGTTTGA 1116 0.4471 MGDKSQVLEAVLKEAVDLESKFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAPKAKSSLTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHFQKRVFGVSTLEKTAHDDIRKLASAIYLQVSTVSQALIFVTRSRGWSYVERPGIWLVTAFIIAQLIATLIAVYANWSFAAIEGIGWGWAGVIWLYNIIFYIPLDPIKFLIRYVLSGRAWELVIEQRIAFTRQKDFGKEQRELQWAHAQRTLHGLQPPDTKMFTERTHFNELNQMAEEAKRRAEIARLRELHTLKGHVESVLKLKGIDVDTIQQAYTV 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1013 371 Gene3D - 320 371 - -
Aed10g1013 371 SUPERFAMILY Calcium ATPase, transmembrane domain M 19 162 IPR023298 -
Aed10g1013 371 Pfam E1-E2 ATPase 97 160 - -
Aed10g1013 371 PANTHER PLASMA MEMBRANE ATPASE 1 98 158 - -
Aed10g1013 371 Gene3D - 28 99 - -
Aed10g1013 371 Gene3D - 151 267 - -
Aed10g1013 371 PANTHER CALCIUM-TRANSPORTING ATPASE 18 97 - -
Aed10g1013 371 Gene3D - 100 150 - -
Aed10g1013 371 PANTHER CALCIUM-TRANSPORTING ATPASE 158 352 - -
Aed10g1013 371 Coils Coil 322 342 - -
Aed10g1013 371 SUPERFAMILY Calcium ATPase, transduction domain A 97 146 IPR008250 -
Aed10g1013 371 PANTHER PLASMA MEMBRANE ATPASE 1 158 352 - -
Aed10g1013 371 PANTHER PLASMA MEMBRANE ATPASE 1 18 97 - -
Aed10g1013 371 SUPERFAMILY Calcium ATPase, transmembrane domain M 173 268 IPR023298 -
Aed10g1013 371 PANTHER CALCIUM-TRANSPORTING ATPASE 98 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1013 Aed-Chr10 8908311 8915208 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1013 155 371 Primary Pumps ATPases AT5G62670 88.018 1.78e-134 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1013 K01535 - gmx:100782459 407.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g1013 10 8908311 8915208 Aed10g1013 10 8908311 8915208 ECH