Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1009 ATGGAGGAGTTTTCGAATTTGGTCCTTAACTCGAAGTGGGCATCGACGGTGGCGAGCATATGGATCCAGTGCACCAGCGGGTCACTCTACACATTCTCCATCTACTCCCAAACTCTGAAGTCAACCCAGCACTACGATCAGTCAACGCTCGACCTCGTCTCTGTCTCCAAGGACATCGGAGTCAACGTCGGCGTCCTCTCCGGCCTCCTCTACGACTTCCTGGCCCGCAGAACAACCACAACCGGGCCCTGGTTCGTCCACCTTCTGGGCTCGGCCCAATGCTTCCTGGGCTACTTCCTCATGTGGGCCGCCGTCGCCGGCCTCTTTCCGCCGGTGCCCCTGCCCGTCATGTGTTTGTTCATGTTTGTGGCTGCTCACGCTCAGAGCTTCTTTAACACTTCCAATGTTGTCACCGGCGTGCATAATTTCCCCAACAATAGCGGAACCATAGTCGGCATTATGAAGGGATTTCTTGGTCTGAGTGGAGCAATACTAATTCAAGTGTACCGAACAATATTCAACAACCAGCCAATATCATATCTTCTGATGCTAGCCCTGTTACCACCTATAAACACATTGCTGCTTATGTGGTTTGTAAGAATCCACCACACTCGCGAGCCCGAAGAAAGGAGGTACCTGAATACATTTTCTTTGATGGCTCTGGTTGTTGCTGCATACCTTATGGTTGTTATAATCCTAGAGAACATCCTCAGTCTGCAATTGTTGGCGCGCGTCTTTATACTTGTTGTGCTTATGTTGTTGCTAGCCTCACTTCTCTGCATTGCATTCAAAGCACATGAAAAAAGCTCTGCTAGAAGTTCAGAAAGTTTTGATGAGAGGTCTCAACTAATTGTGGAGCAAGATACTACTGAAAAGGTGCATGCAAGGACTAATTTCAATTTGCAGCTAGGAGAAAACCTGAATCTTTTGCAAGCAGTGAAGACTCTGAACTTTTGGATTTTGTTTATTTCTGTGGCATGTGGCATGGGATCGGGACTTGCAACTGTTAACAACTTGGGACAAATAGGGGAATCCCTTGGTTACACCAGCCATGAGACAGGCTCCTTGGTTTCCTTGTGGAGCATTTGGAATTTCCTCGGCCGCTTTGGAGCAGGTTACATGTCGGATTATTATTTGCACACAAGAGGGATGGCAAGACCTTTGTTCATGGTGATCACATTGTTGATCATGAGCATTGGTCATGTTGTGATTGCTTCTGGATTTCCTGGTGCCCTGTATGCTGGTTCAGTGTTGGTTGGCATTTGTTATGGTTCTCAGTGGTCCCTAATGCCAACAATCACTTCTGAGATATTTGGTGTTGGAAACATGGGAAGCATATTCAACACCATTTCTATAGCAAGTCCAGTGGGATCTTATATATTCTCTGTAAGAGTGGTTGGATATGTATATGACAAAGAAGCTTCGGAAGGAAGTACTTGCATTGGAACTCATTGTTTTATGCTTTCTTTTCTTATAATGGCATCTGCCACTATTCTTGGTTCTTTGACAGCTTTAGGTTTGTTTTTAAGGACAAAAGATTTCTATGGTCGGGTTATACTCAGAAGAATTCAAAATATTCAGTGA 1584 0.4558 MEEFSNLVLNSKWASTVASIWIQCTSGSLYTFSIYSQTLKSTQHYDQSTLDLVSVSKDIGVNVGVLSGLLYDFLARRTTTTGPWFVHLLGSAQCFLGYFLMWAAVAGLFPPVPLPVMCLFMFVAAHAQSFFNTSNVVTGVHNFPNNSGTIVGIMKGFLGLSGAILIQVYRTIFNNQPISYLLMLALLPPINTLLLMWFVRIHHTREPEERRYLNTFSLMALVVAAYLMVVIILENILSLQLLARVFILVVLMLLLASLLCIAFKAHEKSSARSSESFDERSQLIVEQDTTEKVHARTNFNLQLGENLNLLQAVKTLNFWILFISVACGMGSGLATVNNLGQIGESLGYTSHETGSLVSLWSIWNFLGRFGAGYMSDYYLHTRGMARPLFMVITLLIMSIGHVVIASGFPGALYAGSVLVGICYGSQWSLMPTITSEIFGVGNMGSIFNTISIASPVGSYIFSVRVVGYVYDKEASEGSTCIGTHCFMLSFLIMASATILGSLTALGLFLRTKDFYGRVILRRIQNIQ 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1009 527 Pfam Nodulin-like 12 262 IPR010658 -
Aed10g1009 527 Gene3D MFS general substrate transporter like domains 185 502 IPR036259 -
Aed10g1009 527 Pfam Major Facilitator Superfamily 321 510 IPR011701 GO:0022857|GO:0055085
Aed10g1009 527 SUPERFAMILY MFS general substrate transporter 16 206 IPR036259 -
Aed10g1009 527 CDD MFS_Mch1p_like 11 500 - -
Aed10g1009 527 SUPERFAMILY MFS general substrate transporter 216 513 IPR036259 -
Aed10g1009 527 PANTHER PROTEIN NUCLEAR FUSION DEFECTIVE 4-LIKE 8 525 - -
Aed10g1009 527 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 8 525 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1009 Aed-Chr10 8860285 8868716 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1009 8 525 Nodulin-like Gene Family AT1G74780 55.263 0.0 577
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1009 - - gmx:100814668 861.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g1009 10 8860285 8868716 Aed10g1009 10 8860285 8868716 ECH