Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1007 ATGATAACAAGATCAAACTCACAATATTTGTCCACCGTTAACTTTGTTCCAATGGCATACAAGAAGAATGCATCCACCCCTAATGTTGAAAACAAAGAGGTCATATTCATCAAATCTTCAAAACCCACTCCTACCATCACTTTGTCACTGTCTAGCATTGACAATGCCCCAGAGAACAATTTCTTTACGCAAACCCTTCATGTATACCCAAATTCCCTTAACACTCCCAACCCTGCAAAAGTGATCAAAGAGGCTCTCTCAAAGGCACTCTTCTACTATTACCCTCTTGCAGGAAAATTAGTAACACACTCCGATGGAAAACTCAGAGTCAAGTGCAACCCTAACTCCGAAGAAGGAGTTCCATTCATAGAAACTATTTGCAACTGCGACCTCTCATCTCTCCATTACCTAGACGGTGATGACGGCGTTGCAATGGCGAAGCACTTTGCGGTGGATTTTCCTCCTGAAGATGAGTTGGGAAACCAATACCCTTTGGTTTTAAAGGTCACTAAATTTCTCTGTGGTGGTTTCACCATTGTAATGGGATGGTCACACGCTGTTATGGATGGGACTGGGACGTCCCAGTTCTTACGAGCCCTGGCGGAACACGCAAGTGGAAAAACTGAGCCTTCTGTGAAACCCGTGTGGGAAAGAGAGAGACTGGTGGGAAGTTTCACCAATCAACCCATGCAAAACCCCATGGACAAGACCACTGTTGCAGTTTCACCGTTTCTTCCAACCACGGATTTCTCTCACGTTTGCTCTAAGATGGGTTTCATGAAAGAAAATGACAGTGAAAAAACAACCAAGAAGAAAGGGTTCACAACTTATGAAACTCTAGCTGCGTATATTTGGAGGTCAAGAGCGAGAGCCTTGAAGCTTAACTACGATGGAAAAACCATGCTAGTTATCATAGTGGGAGTGAAGACACGCTTGTGGAATCCTTTGCCCAATGGATACTACGGAAACACCATCGTGGAGGCGTGTGTTGTGTCAACAGTGAAGGAGCTCAACGAAAAGCCCCTCTTTGAGGTTGTGAAGCAAATAAGAGAGAGCATAGAGGGTGCTTTTAGCAATGATTATATCAAACACTCGCTTGATACCATGGAGACGAAAGCAATGAGATTTAGCAATGAAAGCGGTGCGATAATGACTTTGACTGATTGGAGGCATTTGGGTTTGTTGGAGAAGGTTGATTTTGGGTGGAAGGAGCCTGTGAATACTATGCCAGCCCCGTGTGATGCGTATGGATCGATGGGTTTGTGCAGGATCTTGCCTCCATGTAATTTGGACCCTTTGATGAATGGAGGAGTTAGGGTTTATGTGTCACTACCTAGTGATGCCATGCCCAAGTTCAAGGAAGAGATGAAAGCTTTTGAGAGTGTGTCCTAA 1392 0.4447 MITRSNSQYLSTVNFVPMAYKKNASTPNVENKEVIFIKSSKPTPTITLSLSSIDNAPENNFFTQTLHVYPNSLNTPNPAKVIKEALSKALFYYYPLAGKLVTHSDGKLRVKCNPNSEEGVPFIETICNCDLSSLHYLDGDDGVAMAKHFAVDFPPEDELGNQYPLVLKVTKFLCGGFTIVMGWSHAVMDGTGTSQFLRALAEHASGKTEPSVKPVWERERLVGSFTNQPMQNPMDKTTVAVSPFLPTTDFSHVCSKMGFMKENDSEKTTKKKGFTTYETLAAYIWRSRARALKLNYDGKTMLVIIVGVKTRLWNPLPNGYYGNTIVEACVVSTVKELNEKPLFEVVKQIRESIEGAFSNDYIKHSLDTMETKAMRFSNESGAIMTLTDWRHLGLLEKVDFGWKEPVNTMPAPCDAYGSMGLCRILPPCNLDPLMNGGVRVYVSLPSDAMPKFKEEMKAFESVS 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1007 463 Gene3D - 25 233 IPR023213 -
Aed10g1007 463 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 25 460 - -
Aed10g1007 463 PANTHER ACYL TRANSFERASE 4 25 460 - -
Aed10g1007 463 Pfam Transferase family 29 457 - -
Aed10g1007 463 Gene3D - 254 456 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1007 Aed-Chr10 8854937 8856980 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1007 32 454 Monolignol Biosynthesis Gene Families AT5G48930 26.770 6.24e-32 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1007 K20240 - gmx:100783730 626.32