Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1003 ATGTCCCAAGGATCTCCCCGGCAAGACACCACCGAACCCTCGCCGGAACCCGATTCGCACAAGGAGGAAACAACTGCAACCGCCGGCAACACCGCCAGCAAAGCCGTCGATGCTGCTACTCCTCCCGCCCCGACGCGTAGCCGCCCCTCCCGCGCCTGCACTATTCGCGCGGCTGCACGGCTCTACACGGCGTCGCAGCCGGCGAGGCAGAAGGCCTCGAAGAGGGAGCCCCGCCGCGAGGAGTCGCCGGAGCCGCCGTCTTCGCAGCTGCAGCAATGCAACAAGATCGTGACGCCGCTTGTGGAACCGCCCACGCCGGCGCTGTTGCCGCGCTACAACCTCCGGTCCATGTGGGAATTGGCTTCAATACTCAATTTTTTGAATCTGTTTAGGCCTCTTTTGAATATTTCAGTAGAATTCTCGGCTGAAGAGTTCGAGACGGCTTTGCTCACCCCCAATGACACATTGGGTCATATACATATGCCTCTGCTAAAGGCAATTCCTCCCATTACACGAATGGCACTCTCACGTGATACTTGGATAACCGTATTATGCAGAAAATTGAGAGATTGGTGGCACTGGGTTGCGGATGGGGATCTTCCTATTGTTGCTTCACATGGAGCGGAGATTGAAGTATATAAATCACTTGATCCAGGGGTTCGGGTGGTCATCTTAAAAGCATTATGTGACATTCGTGTTGAGCAAGAAGATATCAGAGGTTACATTGACAGCTCAATCAAACATGGCATTCCACTTTCAACATTCCGTAAGGATCGTATTGGTGGTGATTCACATGGAGTTTCTTATTGGTATGAAGATGACCAAATTATTGGTCATAGGTTGTATCGGGAAATAAGGAAAACTGAGGTGGTTCAAATGAAGAAAGGGAAACCAAGAGGTTCCCAGGTTTTTTCTAATACAACCTACCAGTGGGAAACAGTTGCTACCAATTTTGATGAATTTCAGGATGTTTCTGAGAAGCTTTTCACAAGTAAAAACAGAACAGAGGTTTCTGTAGGGAAGAAGGTGAAGATAGACATGCTCCCTGAAATTGAGAAAGTTCACAAGAGAAAGGAGAGGTTGATGAAAAAACAACACAGACAAGCTCTTCTTCTTGATAATTTCTTGGGTGCTGATGGGATTGCCCCAGGGCGTTCACTTCGTGATAGGAAACCTGTTACCTACACTTTTGATGATTACGATCGATCCATCAATGAGGCAATTAAGATAACCAAACGGAAACCACCATCCCCAGAACCTATACCTAGGAGAGAAGCAGGAGTGAAACCTGAAGCTTTAACCAATGGTAAATGGAGTGGTCCTTCACATGATCCTCAAGACCTGAATTTTGGCATGCCATCTCCAAAATCGCCCGACTTCGATGATATGGAGGAAGATGATGAAACTGACATGTTGGACTTGGATCGAAGCAATCGGCGAAGACAGAAGCCTAAACGGTATTCAGAGAATGAGTTTGTTCAAGCAATGTCAGATAATGAGGCTGACTATGACAGTGATGATGATATTGTTGGAGAGGCTGTGTACGATGAAGAACGCAGCAAGAGGGCAACAACAAAAAGCCGTATAAATTACCGAAGGTATGAGATATCTGATTCAGAAACAGAGTTCATTAAATCCGACAAGTCCAATGCATCAGACGATCACTCAGATCCTACTGAGAATGGGGATTTCATGATGGAAAGTGAAGACTCCGATGGCAACTACGAGGAAGAACAAGAAGAAACCAAAGTAGTCAAGCCTGTTACTTACCCTGCAGAAGAAAACAACCAATCTCCTGCCGTAGAAGAGAGTGAACAAATCCAAAACCAAAACCAGCCTCCTGAAAAATCCAGTAGTCCAGGTCAGGAGGAAGTTGAGGGCACCGCAAAGCGACGTTTCCTTGATTTGAATGAGCTTGCCCCTAGCTCAGGTTTTGATGATGGTCCAAATACAACACTGAAAGATGAAGGCAATGATGATAACTGA 1986 0.4688 MSQGSPRQDTTEPSPEPDSHKEETTATAGNTASKAVDAATPPAPTRSRPSRACTIRAAARLYTASQPARQKASKREPRREESPEPPSSQLQQCNKIVTPLVEPPTPALLPRYNLRSMWELASILNFLNLFRPLLNISVEFSAEEFETALLTPNDTLGHIHMPLLKAIPPITRMALSRDTWITVLCRKLRDWWHWVADGDLPIVASHGAEIEVYKSLDPGVRVVILKALCDIRVEQEDIRGYIDSSIKHGIPLSTFRKDRIGGDSHGVSYWYEDDQIIGHRLYREIRKTEVVQMKKGKPRGSQVFSNTTYQWETVATNFDEFQDVSEKLFTSKNRTEVSVGKKVKIDMLPEIEKVHKRKERLMKKQHRQALLLDNFLGADGIAPGRSLRDRKPVTYTFDDYDRSINEAIKITKRKPPSPEPIPRREAGVKPEALTNGKWSGPSHDPQDLNFGMPSPKSPDFDDMEEDDETDMLDLDRSNRRRQKPKRYSENEFVQAMSDNEADYDSDDDIVGEAVYDEERSKRATTKSRINYRRYEISDSETEFIKSDKSNASDDHSDPTENGDFMMESEDSDGNYEEEQEETKVVKPVTYPAEENNQSPAVEESEQIQNQNQPPEKSSSPGQEEVEGTAKRRFLDLNELAPSSGFDDGPNTTLKDEGNDDN 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1003 661 PANTHER REMODELING AND SPACING FACTOR 1 519 660 IPR028938 GO:0006355|GO:0031213
Aed10g1003 661 MobiDBLite consensus disorder prediction 514 562 - -
Aed10g1003 661 MobiDBLite consensus disorder prediction 591 624 - -
Aed10g1003 661 MobiDBLite consensus disorder prediction 472 488 - -
Aed10g1003 661 MobiDBLite consensus disorder prediction 408 426 - -
Aed10g1003 661 MobiDBLite consensus disorder prediction 408 661 - -
Aed10g1003 661 PANTHER REMODELING AND SPACING FACTOR 1 24 518 IPR028938 GO:0006355|GO:0031213
Aed10g1003 661 PANTHER DDT DOMAIN-CONTAINING PROTEIN DDR4 24 518 - -
Aed10g1003 661 MobiDBLite consensus disorder prediction 563 577 - -
Aed10g1003 661 MobiDBLite consensus disorder prediction 1 93 - -
Aed10g1003 661 PANTHER DDT DOMAIN-CONTAINING PROTEIN DDR4 519 660 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1003 Aed-Chr10 8800207 8807858 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Aed10g1003 WHIM1 0.00014 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1003 - - gmx:100796430 986.097
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g1003 10 8800207 8807858 Aed10g1003 10 8800207 8807858 ECH
Aed6g1525 6 19441118 19448156 Aed10g1003 10 8800207 8807858 PCT