Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1001 ATGGTGAGGTCTCCTTGTGAAAAAATCAATGTCAAAAGAGGTGTGTGGACTACAGAAGAAGATACAAAGAAGCTTGCATTTGGCTCCAAGCATGGATCTGGACTCAAAAGGTGTGGAAAGAGTTGTAGGCTTAGGTGGAGTAATTGCCCTAGGCCTGATCTTAATCATGACAACTTCACAACCCAAGAAGAAGATCTAATTATTAAGCTTCATGCAGCCATTGGTAGCAGGTGGCCTATAATAGCACAACAACTTCCTGGGAGAACAGACAATGATGTAAAGAACTACTGGAACTCAAAGCTGAAAAAGAAGCTCTCTCAAATGGGGATTGACCCTGTTACCCACAAGCCCTTCTCTAAACTCATTGCTGACTATGGAAACATTGGGGGTTGCCAGAAACAAAGCACCAGAATTGGGTCAATCAACAAGGACTTCAAGAATGCAATGATGTTAAAATCAGAACCACCCCATCATAGCATGTCACAACAAGGATTCACAAACATCAATGACCAGCCAAAGCCACCACCCACAATGGAAACAACTGGAAACAACTTTTCATTTAAGAAAAAATCAATAAATCTTGACCAGTTCCAAGCCATACCAATGGTGGCAAGTGCCTCAAATTGCATAGACTTTGAGAATGAGACCATTACAGGATCTATGCTTGGAGAAGATTGCTTGTCAAAAACTTCATCACCATCTACTCCTCCTTCTACTTGTTCCACGTCAGCTTTTAGTTGGAATGACTTCCTCCTAGAAGATGCTTTTGCACCACTTGATAACCAAGAACAAGACAACATCATGGTTTCAAAGGACTTGGTGAGCCAAATAGAGAGTGTGACAAGACCATGTTGGAATAAGAAAGAGGTTAAGTCACAACAAGCCTCATGTAGTGACTTCCAGTTTTCATCATCCTCTGACATTTCATTCATGGAAGCCATGCTTGATCAAGAAAACGAGATGTTCCTTAGTTTTCCTCACCTTATGGAGGAACCATCCAATTTGAATTGA 1011 0.4125 MVRSPCEKINVKRGVWTTEEDTKKLAFGSKHGSGLKRCGKSCRLRWSNCPRPDLNHDNFTTQEEDLIIKLHAAIGSRWPIIAQQLPGRTDNDVKNYWNSKLKKKLSQMGIDPVTHKPFSKLIADYGNIGGCQKQSTRIGSINKDFKNAMMLKSEPPHHSMSQQGFTNINDQPKPPPTMETTGNNFSFKKKSINLDQFQAIPMVASASNCIDFENETITGSMLGEDCLSKTSSPSTPPSTCSTSAFSWNDFLLEDAFAPLDNQEQDNIMVSKDLVSQIESVTRPCWNKKEVKSQQASCSDFQFSSSSDISFMEAMLDQENEMFLSFPHLMEEPSNLN 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1001 336 PANTHER F14D16.11-RELATED 1 333 - -
Aed10g1001 336 ProSiteProfiles Myb-like domain profile. 51 101 IPR001005 -
Aed10g1001 336 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 51 105 IPR017930 -
Aed10g1001 336 Pfam Myb-like DNA-binding domain 58 99 IPR001005 -
Aed10g1001 336 SMART sant 12 52 IPR001005 -
Aed10g1001 336 SMART sant 55 103 IPR001005 -
Aed10g1001 336 CDD SANT 58 101 IPR001005 -
Aed10g1001 336 SUPERFAMILY Homeodomain-like 36 109 IPR009057 -
Aed10g1001 336 Gene3D - 58 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1001 Aed-Chr10 8782820 8784590 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1001 1 331 MYB Transcription Factor Family AT3G28470 38.462 1.63e-54 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aed10g1001 Myb_DNA-binding 4.2e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1001 K09422 - gmx:100795381 493.426
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g1001 10 8782820 8784590 Aed10g1001 10 8782820 8784590 ECH