Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0995 ATGCCTCTCTCCTCCTCGTCCGCCGCCAACTCCTCCGTCTGCGGCGAGATCATGCTGTTCGGCGTGAGAGTCGTGGTGGACCCCATAAGGAAGAGCGTGAGTATGAACAACCTCTCGCAGTACGAGCTCCCTCGCGACGCCGCCAAAGACGACGACGCCGTCGTCGCCGCTGTCTACGCATCCGCCGACGACGCGGCTCCGATCAACTCCGGCAAGAGCCGCGACCGCAAGCGAGGGATTCCATGGACGGAGGAAGAACACAAGCTATTCTTGGTGGGGTTGCAGAAAGTGGGGAAAGGTGATTGGAGAGGAATCTCAAGGAACTATGTGAAAACGAGGACCCCAACTCAGGTTGCTAGCCATGCTCAGAAGTACTTTCTCCGCCGGACCAACCTCAATCGCCGTCGCCGGAGATCCAGCCTCTTCGACATCACCACCGATTGGGTCTCTACAACCCCAATGGATGAAGCACAGATCCAGCATCAAGATAATGTGCCTCTCTTTCATCCCATGTACCCTGTAACCCCTGAAGGAAGCAACATGAATGGATTTCCAATGATGTCCGTGTATCCAAAGGATGTTGTTGGTTCTGGAGTCATGTCAGTTCAAGCTGGGAATCCAATGGAAACACTCACTTTGGGACAAGGAAATACTGTGGAACAGAATAATGGGCCAAGTACTAAGCTAGTTTGTTGTTCAACCCCTATTGTTCCAGATCATAGAGGCTCCACAGTGTCTGATATCACTGCAAGTTTGAGTTCCATTGATCCACCAACACTGTCTCTGGGGTTATCTTTGTCATCTAGTGAAAGACAAACATCATCATCAATACGTTCAGCTTTACATGCTCTGCCATATGCTTCAACAATCAAGATAGCAGCATCCTAA 888 0.5113 MPLSSSSAANSSVCGEIMLFGVRVVVDPIRKSVSMNNLSQYELPRDAAKDDDAVVAAVYASADDAAPINSGKSRDRKRGIPWTEEEHKLFLVGLQKVGKGDWRGISRNYVKTRTPTQVASHAQKYFLRRTNLNRRRRRSSLFDITTDWVSTTPMDEAQIQHQDNVPLFHPMYPVTPEGSNMNGFPMMSVYPKDVVGSGVMSVQAGNPMETLTLGQGNTVEQNNGPSTKLVCCSTPIVPDHRGSTVSDITASLSSIDPPTLSLGLSLSSSERQTSSSIRSALHALPYASTIKIAAS 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0995 295 Gene3D - 80 132 - -
Aed10g0995 295 PANTHER KIN2 14 278 - -
Aed10g0995 295 ProSiteProfiles SANT domain profile. 82 130 IPR017884 -
Aed10g0995 295 PANTHER TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED 14 278 - -
Aed10g0995 295 Pfam Myb-like DNA-binding domain 81 126 IPR001005 -
Aed10g0995 295 CDD SANT 81 126 IPR001005 -
Aed10g0995 295 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 74 130 IPR017930 -
Aed10g0995 295 ProSiteProfiles Myb-like domain profile. 74 126 IPR001005 -
Aed10g0995 295 SUPERFAMILY Homeodomain-like 76 130 IPR009057 -
Aed10g0995 295 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 77 128 IPR006447 GO:0003677
Aed10g0995 295 SMART sant 78 128 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0995 Aed-Chr10 8733904 8737106 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aed10g0995 Myb_DNA-binding 1.5e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0995 - - gmx:778056 421.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1508 6 19316303 19318366 Aed10g0995 10 8733904 8737106 PCT