Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0989 ATGGAATCACTCTTTGGATATTCAAGCAACTACAAAACCCAAGAAAGAAACAGAACTCTTTCTACTTTGGCCAAGTCCAATTCCAATGCACCAGCTCAAATATTCATTCTTGAGCCAAGAAAATCTCAAAACACAGCAATTGTGCTAAGATCACTTGCCATTTCTCGCAAGGGAATCTTGGATGCAGTTCTTGATGGTCAAGGACTTAGTGTTGAAACACTTGAAAGACTAACTAAAATAGCTCCCACCCAAGAAGAGGAAGCCAAAATCATCCAATTCAGTGGCAACCCAGATCAGCTTGCTGATGCCGAGTCTTTCCTATATTACATTCTCAAAGCAGTGCCAACAGCATTCAACCGTTTGAAAGCAATGCTTTTCAGGTCGAGTTACGATTGCGAAGTTCTTCAGCTCAAGGAGCAGCTACAAACACTTGAGATGGGTTGCAAGGAGTTAAGAACTAGTGGATTGTTTCTGAAACTCCTTGAGGCCATTCTCAAAGCCGGGAACCGGATGAATGCCGGAACATCAAGAGGCAATGCACAAGGTTTCAACCTGAGCTCCCTTACAAAACTCTCTGATGTGAAAAGCACAGATGGGAAGACTAGTTTGCTTCACTTCATAGTGGAACAAGTGGTTCAGTCAGAAGGGAAAAGACAAGCTATGTATCAAAAGCACAAACTTCACAATCACATAAGCAAGGGTGAACCAAGCAATGTGAATAGACCTTATTCATATAGCCTGAAACAGCAAGAAGCAGATAAAGAACATGTAATGCTTGGTTTGCAAGTGTTAGGTGGTTTAAGTGAAGAGTTGTCTGAAGCAAAGAAAGCAGCTAGCATTGAGTATCACAATTTCATCACTATGTGTTCAACTCTCAATGCTCATGTTAGTGAAATTAGACAGATTATAACATGCTGTGGCAATACTAGGAGTGGTGGATTCATCAATGAAATGAAAGGGTTCCTAGAGGAGTGTGAGGCAGAACTTGAGGTGGTGAAAGAGGAGCAGACAAGGATCATGGAGCTTGTGAAGAGAACAAACGAGTACTATCTAGCAGGAGCATCCAAAGAAAATATGGTAAACCCTTTTCAACTATTTGCTATTGTGAAGAGTTTTGTTGACATGGTGGACCAGGCATGCATAGAACTGAAAAAGAAGGTAGAAAAGAAGAATGTTGTGGGGGTAGAGGCTGTGTCAACAACACCACCTTTGTCACCATCAAAGAGGACGCCACTTAGATTCCCTAACTTCGATTTGTATTTTACGTCAAATGTGTCAGAAACTACATCTTCTAGCCAATCAGAAGATGATTTCTGA 1317 0.4131 MESLFGYSSNYKTQERNRTLSTLAKSNSNAPAQIFILEPRKSQNTAIVLRSLAISRKGILDAVLDGQGLSVETLERLTKIAPTQEEEAKIIQFSGNPDQLADAESFLYYILKAVPTAFNRLKAMLFRSSYDCEVLQLKEQLQTLEMGCKELRTSGLFLKLLEAILKAGNRMNAGTSRGNAQGFNLSSLTKLSDVKSTDGKTSLLHFIVEQVVQSEGKRQAMYQKHKLHNHISKGEPSNVNRPYSYSLKQQEADKEHVMLGLQVLGGLSEELSEAKKAASIEYHNFITMCSTLNAHVSEIRQIITCCGNTRSGGFINEMKGFLEECEAELEVVKEEQTRIMELVKRTNEYYLAGASKENMVNPFQLFAIVKSFVDMVDQACIELKKKVEKKNVVGVEAVSTTPPLSPSKRTPLRFPNFDLYFTSNVSETTSSSQSEDDF 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0989 438 PANTHER FORMIN-RELATED 1 434 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Aed10g0989 438 Coils Coil 134 154 - -
Aed10g0989 438 PANTHER FORMIN-LIKE PROTEIN 1 434 - -
Aed10g0989 438 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1 402 IPR015425 -
Aed10g0989 438 Coils Coil 315 342 - -
Aed10g0989 438 Pfam Formin Homology 2 Domain 2 376 IPR015425 -
Aed10g0989 438 SMART it6_source 1 391 IPR015425 -
Aed10g0989 438 SUPERFAMILY Formin homology 2 domain (FH2 domain) 33 391 - -
Aed10g0989 438 Gene3D Formin, FH2 domain 1 394 IPR042201 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0989 Aed-Chr10 8682522 8683838 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0989 1 436 FH2 protein (formin) Gene Family AT1G70140 44.875 8.73e-125 378
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0989 - - gsj:114409782 760.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0989 10 8682522 8683838 Aed10g0989 10 8682522 8683838 ECH