Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0987 ATGACAGCCACGTGGACCGCAAGGTCATTGAACGCTTTGACGGTGGTGGATAGTGGAAGCAGGGCTCTGCAGTATCTGGGGTTGGATGGGGATGATAACTCCATTGCTCTTGATAGTGTGAAAGTTAATTTGATAATGACGGATTATTCCATGCCGGGGATGACAGGATACGAATTGCTCAAGAAGATAAAGGAGTCATCTGTTTTTAGAGAGGTTCCAGTGGTGGTTATGTCGTCTGAGAATATCTTGACCCGAATTGATAGTTGCTTGGAGGAAGGGGCAGAGGAGTTTCTGTTGAAACCTGTCAAGTTGTCCGATGTAAAACGCGTTACCGATTTCATCATGAGTGGTGAAGGGAAGAAAGGAGTAAAAAGATCTAAAAAAAGAAGCAGATCAGATGATTGCATTCCATCTTTATCAGCTGCATTCTCATCCGTTTCTCATCCATGCAATCTGTCATCACCTCCATCACCGTGTGTATCACAGTTGAAGAAACCTAGAATCTAA 507 0.4379 MTATWTARSLNALTVVDSGSRALQYLGLDGDDNSIALDSVKVNLIMTDYSMPGMTGYELLKKIKESSVFREVPVVVMSSENILTRIDSCLEEGAEEFLLKPVKLSDVKRVTDFIMSGEGKKGVKRSKKRSRSDDCIPSLSAAFSSVSHPCNLSSPPSPCVSQLKKPRI 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0987 168 Gene3D - 2 130 - -
Aed10g0987 168 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR3-LIKE PROTEIN 13 163 - -
Aed10g0987 168 MobiDBLite consensus disorder prediction 145 168 - -
Aed10g0987 168 SUPERFAMILY CheY-like 36 114 IPR011006 -
Aed10g0987 168 Pfam Response regulator receiver domain 37 108 IPR001789 GO:0000160
Aed10g0987 168 ProSiteProfiles Response regulatory domain profile. 1 115 IPR001789 GO:0000160
Aed10g0987 168 PANTHER TWO-COMPONENT RESPONSE REGULATOR 13 163 IPR045279 GO:0009736
Aed10g0987 168 SMART REC_2 1 111 IPR001789 GO:0000160
Aed10g0987 168 MobiDBLite consensus disorder prediction 145 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0987 Aed-Chr10 8674105 8676123 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0987 13 168 Response Regulator Gene Family AT3G48100 57.325 2.13e-56 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Aed10g0987 Response_reg 6.8e-15 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0987 K14492 - gmx:100819165 259.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0987 10 8674105 8676123 Aed6g1501 6 19248420 19251115 ECH
Aed10g0987 10 8674105 8676123 Aed10g0987 10 8674105 8676123 ECH