Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0982 ATGGCAATCACAGTACCCAGTAGACAGCTTTTCATAGATGGAGAGTGGAAAGTCCCTGTTCTCAACAACCGTATTCCGATCATCAACCCTGCCACTCAAGACATCATAGGGCATATCCCAGGTGCTACTAAGGAAGATGTTGACCTTGCGGTTGATGCTGCTAAAAGAGCCTTTTCTAGGAACAGAGGCAAAGATTGGTCTTCAGCCCCTGGCTCTGTTCGTGCTCGCTATCTTCGAGCCATCGCTTCAAAGATAACAGAGAAAAAGGATGAACTAGGAAAGCTTGAAACAATTGATTGTGGAAAACCACTAGACGAAGCACTAGGAGACCTTGATGAAGTTATTGGTAGTTTTAACTACTATGCTGAGCTTGCAGAAGGGTTGGATGCAAAGCAAAATGCTCCTGTATCCCTTCCTTTGGAAACCTTCAAGAGTTATGTTCTCAAGGAGCCCATTGGGGTTGTTGCATTAATTACTCCATGGAATTATCCACTCTTGATGGCTACATGGAAGGTTGCTCCTGCTCTAGCTGCTGGTTGTACTTTAATATTGAAGCCATCTGAATTGGCATCTGTGACCTGTTTGGAGCTAGCTGAAATATGCAGGGAAGTGGACCTTCCTCCAGGGGTATTAAATATTGTAACTGGATTAGGCAATGAAGCTGGTGCTCCTTTGGCATCTCATCCTGATGTAGACAAGATTTCCTTTACTGGAAGCTCTGCAACTGGAAGCAAGATTATGGCAGCTGCAGCACAGCTAACCAAGCCTGTTTCTCTAGAGCTTGGTGGAAAAAGCCCAATCATTGTTTTTGAGGATGTTGACCTTGATAAGACTGCTGAATGGACCATCTTTGGCTGCTTCTTTACAAATGGTCAGATATGCAGTGCAACGTCTCGCCTTATTGTGCATGAAAGTATAGCAACAGAATTTGTGGATAAACTTTATAAAAAAGTGTTGAATTTTATCTCAACTGCTAAGAGTGAGGGTGCAACAATTTTGACTGGAGGGTCTCGCCCAGAGCATTTGAAAAATGGGTACTTTGTTGAACCAACCATCATAACCGATGTGACTACCTCAATGCAAATTTGGAGAGAAGAAGTTTTTGGACCTGTGCTCTCTGTGAAAACATTCAGTACCGAAGAGGAAGCTATTGAACTAGCAAATGACACACACTATGGCTTAGGGTCTGCTGTAATGTCAAAAGATCTAGAAAGATGTGAGCGCATATCTAAGGGGACTGGAGAACTATTTAAGTGTGAAGCAAGTGACCAAGTACATATCTGA 1284 0.4307 MAITVPSRQLFIDGEWKVPVLNNRIPIINPATQDIIGHIPGATKEDVDLAVDAAKRAFSRNRGKDWSSAPGSVRARYLRAIASKITEKKDELGKLETIDCGKPLDEALGDLDEVIGSFNYYAELAEGLDAKQNAPVSLPLETFKSYVLKEPIGVVALITPWNYPLLMATWKVAPALAAGCTLILKPSELASVTCLELAEICREVDLPPGVLNIVTGLGNEAGAPLASHPDVDKISFTGSSATGSKIMAAAAQLTKPVSLELGGKSPIIVFEDVDLDKTAEWTIFGCFFTNGQICSATSRLIVHESIATEFVDKLYKKVLNFISTAKSEGATILTGGSRPEHLKNGYFVEPTIITDVTTSMQIWREEVFGPVLSVKTFSTEEEAIELANDTHYGLGSAVMSKDLERCERISKGTGELFKCEASDQVHI 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0982 427 PANTHER BETAINE ALDEHYDE DEHYDROGENASE 1 316 - -
Aed10g0982 427 PANTHER NAD-DEPENDENT ALDEHYDE DEHYDROGENASE FAMILY PROTEIN 1 316 - -
Aed10g0982 427 Pfam Aldehyde dehydrogenase family 23 318 IPR015590 GO:0016491
Aed10g0982 427 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 317 414 IPR016163 GO:0016620
Aed10g0982 427 SUPERFAMILY ALDH-like 5 411 IPR016161 GO:0016491
Aed10g0982 427 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 2 262 IPR016162 GO:0016491
Aed10g0982 427 PANTHER NAD-DEPENDENT ALDEHYDE DEHYDROGENASE FAMILY PROTEIN 315 412 - -
Aed10g0982 427 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 259 266 IPR029510 GO:0016491
Aed10g0982 427 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 287 298 IPR016160 GO:0016491
Aed10g0982 427 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 263 316 IPR016163 GO:0016620
Aed10g0982 427 PANTHER BETAINE ALDEHYDE DEHYDROGENASE 315 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0982 Aed-Chr10 8619241 8625554 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0982 1 411 Aldehyde Dehydrogenase Gene Family AT1G74920 71.918 0.0 660
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0982 K00130 - gmx:100170755 759.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0982 10 8619241 8625554 Aed10g0982 10 8619241 8625554 ECH
Aed6g1497 6 19229219 19233298 Aed10g0982 10 8619241 8625554 PCT