Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0979 ATGGAAGAAGCTAGATCACAAATTGGAGAAAAGGGAGTTGAGGGAAGTGATGATGTTGAGATCAAAGAAAATGATGAAGAAGAGGTTCTAAAGAAGATTGTTGCAAGTCATCCTTTGTATGAAGTTTTGATTGAATCCCATATCAACTGCTTGAAGGTGGGATTAACCGAAGCTGGAGAGTTTGATGCAACAAGTGATGCATGGAAGAAACTGGTTAACTCGAAGTCCAAAGCAACTCCAAGTCCAAACACTTCAGAGTTAGATCACTTCATGGAAGCGTATTGCATGGCACTGAGCAAGCTAAAAGAAGCGATAGAGGAACCAACAAAAGAAACCAATGCTTTCATCAGAGCTACGTATCTTCAACTAAAGGAACTCAATGAACTGAACTGA 393 0.3995 MEEARSQIGEKGVEGSDDVEIKENDEEEVLKKIVASHPLYEVLIESHINCLKVGLTEAGEFDATSDAWKKLVNSKSKATPSPNTSELDHFMEAYCMALSKLKEAIEEPTKETNAFIRATYLQLKELNELN 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0979 130 Pfam KNOX2 domain 85 126 IPR005541 GO:0003677|GO:0005634
Aed10g0979 130 SMART KNOX2_2 74 128 IPR005541 GO:0003677|GO:0005634
Aed10g0979 130 SMART KNOX1_2 28 70 IPR005540 GO:0003677|GO:0005634
Aed10g0979 130 MobiDBLite consensus disorder prediction 1 22 - -
Aed10g0979 130 PANTHER FUSED COMPOUND LEAF 1 8 124 - -
Aed10g0979 130 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 8 124 - -
Aed10g0979 130 MobiDBLite consensus disorder prediction 1 18 - -
Aed10g0979 130 Pfam KNOX1 domain 30 54 IPR005540 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0979 Aed-Chr10 8561237 8563324 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0979 28 126 Homeobox Transcription Factor Family AT4G08150 33.981 2.75e-11 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0979 - - gmx:102669062 222.246