Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0967 ATGAGTCCAAAACCCATCTGGGGGGTGTTCTTCATTGCAATCTTTTTGTTTCTTCTAATGGCCAATTCAGAAGAAGAAGAAGTGATCAAGGCCCTAGTCACGTTCATGGACAAATTGGCACCACCAGAAAATGTAACAAAAGACTCTATGTGGGGCTGGAACCTTACATCAAATCCCTGCATTGATAAATGGCATGGTCTGAATTGCACTTCAGACAACAAGTATGTTAAAAGTATAATTCTTGAGAAATTCAACTTTGGTGGAGTTGTGGATGCTACCTCTCTTTGCATTGCAAAGTCTCTTCAAATCCTTAGCCTGAAAGACAACGTTTTACATGGTTCGGTATCCGAGAACATAGGAAACTGCAAGTTTTTGACTCACTTGTTCTTAAGTGGGAACAAACTCTCTGGGGACCTTCCTGTTTCTATTGGCAAACTAAGTAACATGAAAAGGTTTCATATTTCTGACAATCACTTCACTGGGGAGCTTCCTAACATGGTCCATGTTTCGAGTTTGATATCCTTTTTTGCTCAAAACAACAACTTCACTGGGGAGATTCCTACTTTTGACTTCTCTAACCTTGATGCCTTTAATGTCTCTAACAACAATTTGCAAGGTCTAGTTCCTGATGTCAAAGGAAGATTCCAAGAAGACAGCTTTTCTGGGAATCCTAACTTATGTGGAAAACCACTTTCAAATGCATGTCCACCACCACCACCACCTGAAAAGAAGGACCAAAAATCGTTCCTTAATGACTTGTCCATTTATTCGGCTTACTTAGTCCTTGTTTTAATTGTCCTTCTTTTCTTGACCTTTAAACTTTTGAGTAATTTCAAGACCAAAGAAAAAGCATTGGATGTTGTTGTTGAAAAGAAGGAAATGGCACAAGAAGCTGTTGCTGGTGTTGGCAAGGCTAGTGAAATATCCAATTCCAATGTGTCAAAGAATGGTACTAACATGATTAGATCAGAGTGTTCCTTGACATCTCTGGAAAGTGGGATGACAACAACATCAGGTCTTGTTCTTCTTTCGAGTCGAACGCTTCGAGGATTGCAATTTGAGGACTTGCTTGGTGCCCCTGCTGAATTGATTAGGAGAGGAAAGCATGGAAGCCTCTACAAGGTTATGCTGGATAATGGGGTGCTGTTGGCAGTGAAGAGGATCAAGGATTGGGGGATTTCAAAGCAAGATTTTGAGACAAGGATGAATTTGATAGCCCAAGTGAAGCATCCACGCGTGTTGCCACCTGTTGCATACTATTGCTCTCAGCAAGAGAAGCTCCTAGCATATGAATTTCTGCAGAATGGTAGTCTCTTCATGTTGCTCTATGGATCTCAAAGTGGCCACTCTTTTGACTGGGGAAACAGACTAAACGTTGCTGCTAAGATAGCTGAGGCTTTGGCATATATGCATGAGGAGTTTCTTGAGGATGGAATAGCACATGGTAACTTAAAATCAAGTAACATTTTATTTGACAAGAATATGGATCCATGCATAAGCGAATATGGCCTAATGATGGCAGAAAATCAAGATCAATTAGTCCTTTCCCACAACAACAAAGGCCTCAAAAGCAAAGATCTGATTTCAGCCACTTTCAAAGCTGATGTATATGCCTTTGGTATGATACTTCTGGAGCTACTGACAGGGAAAGTGGTTAAAAATGATGGATTTGATCTTGCCAATTGGGTGAATTCAGTGGTCAGAGAGGAATGGACTGTTGAAGTTTTTGACAAGTCCTTAATCTCACAAAGTGTTTCTGAAGATAGGATGATGAATTTGTTGCAGGTAGCATTAAAATGTGTAAGTCCTTCTCCAAATGATAGGCCAAGTATGAGCCAAGTTGCAGTGATGACAAATTCTTTGATAGAGGAGGAAGAAAAATCCATATCCTTTGACACATGA 1902 0.4027 MSPKPIWGVFFIAIFLFLLMANSEEEEVIKALVTFMDKLAPPENVTKDSMWGWNLTSNPCIDKWHGLNCTSDNKYVKSIILEKFNFGGVVDATSLCIAKSLQILSLKDNVLHGSVSENIGNCKFLTHLFLSGNKLSGDLPVSIGKLSNMKRFHISDNHFTGELPNMVHVSSLISFFAQNNNFTGEIPTFDFSNLDAFNVSNNNLQGLVPDVKGRFQEDSFSGNPNLCGKPLSNACPPPPPPEKKDQKSFLNDLSIYSAYLVLVLIVLLFLTFKLLSNFKTKEKALDVVVEKKEMAQEAVAGVGKASEISNSNVSKNGTNMIRSECSLTSLESGMTTTSGLVLLSSRTLRGLQFEDLLGAPAELIRRGKHGSLYKVMLDNGVLLAVKRIKDWGISKQDFETRMNLIAQVKHPRVLPPVAYYCSQQEKLLAYEFLQNGSLFMLLYGSQSGHSFDWGNRLNVAAKIAEALAYMHEEFLEDGIAHGNLKSSNILFDKNMDPCISEYGLMMAENQDQLVLSHNNKGLKSKDLISATFKADVYAFGMILLELLTGKVVKNDGFDLANWVNSVVREEWTVEVFDKSLISQSVSEDRMMNLLQVALKCVSPSPNDRPSMSQVAVMTNSLIEEEEKSISFDT 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0967 633 ProSiteProfiles Protein kinase domain profile. 358 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed10g0967 633 Gene3D Ribonuclease Inhibitor 25 190 IPR032675 -
Aed10g0967 633 Gene3D Ribonuclease Inhibitor 191 238 IPR032675 -
Aed10g0967 633 Gene3D Phosphorylase Kinase; domain 1 346 432 - -
Aed10g0967 633 PANTHER OS05G0588300 PROTEIN 5 632 - -
Aed10g0967 633 Pfam Protein kinase domain 364 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed10g0967 633 PANTHER LRR RECEPTOR-LIKE KINASE 5 632 - -
Aed10g0967 633 MobiDBLite consensus disorder prediction 223 246 - -
Aed10g0967 633 Gene3D Transferase(Phosphotransferase) domain 1 433 632 - -
Aed10g0967 633 SUPERFAMILY Protein kinase-like (PK-like) 362 616 IPR011009 -
Aed10g0967 633 SUPERFAMILY L domain-like 55 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0967 Aed-Chr10 8401632 8404051 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0967 53 614 Receptor kinase-like Gene Family AT1G48480 33.502 9.45e-90 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Aed10g0967 Pkinase 1.9e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0967 - - gmx:100787974 1048.88