Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0961 ATGAGCAGCGAATTCCACCGATTCGCGGCGATTTCGGCGGTTTCGTCCCACTTAAGCAGCCTCCCGAAATCCTTCTCCCTGCGAAAGAAAGTCCCATGGTGGTACCAAATCGTGGACCCTCGCTCCCGGTTCGTGGCGCGCTGGAACCGCATGTTCCTCTACGTCTGCATTATTGCGTTGTTCTTGGACCCTCTCTACTTCTACTTCCCCATCACCGGCGACAAGGCCTGCATGCAGACCGACATCGTCCTCGGCGTCTTCGTCACCTTCTCCCGCACCGTCGCCGACCTCTTCTTCCTCAACCACATGGTTCTCAAGTTCCGCACCGCCTTCGTTTCTCCCCTCTCCCGCGTCTACGGCCGCAAGGAACTCGTCACCGATCCTCGCCAGATCGCCTTGCGCTACCTCAAGTCCGATTTCTCCATTGATCTCCTCGCCACCCTTCCTCTGCCTCAGATAGTTATATGGTTCGTGATTCCGGCGGTCAAAAACTCAACGGTGGCTCATGTAAATCACACCCTGTCCTTGATTGTTCTCATTCAGTTTATTCCTCGGCTGTTCCAGATTTTTCCTTTGCAACGCAGAATCTTGAAGACTAGTGGCCTGATTGCCAAAACCGCCTTAGCAGGAGCTCTATACAATCTTGGTTCCTACATGCTAGCCAGCCATGTTTTAGGGGCATCGTGGTACGTGTCATCGATTCAGCGGCAATACGAGTGCTGGAGAATAACATGCACAAACGAGATGAACAGAACGCACTCTCCATCGTGTAAACCTTCGTTTCTGGACTGTGGTACCCTCGGCAACAGCGAAAGGCAAGCTTGGTTCAGACGCACCAGAGTTCTCAGCAAGTGCGATGCCCTCAACCTTAAGAACGAATTCCAGTTTGGAATGTTCGCTGATGCTTTCACTGATCACGTCTCTTCCTCTAGATTCTTCCAGAAATACTTTTATTGCCTCTGGTGGGGTTTGAAGAATCTAAGGTTTTCTAACCTTTTTTTTAATTTCTTCCTCCCTCATGTGAAGTTCATACGGACAAAGTCTTCAGACCAGCACTTACGTTGGGGAAACAATAATTATCTGCTAACTTCAACTGCAAGAGTTGAAGAGTGGAGACTAAAACAGAAAGACACAGAAGAGTGGATGAATCATCGGCAGCTTCCACTAGAACTGCAACAACGTGTTCGCCGATTTGTTCAGTATAAATGGCTCGCCACCAGAGGAGTAGACGAAGAATCCATTCTGCGTGCTTTGCCTTTGGACCTTCGCCGCCAGATTCAGCGGCATCTCTGTCTTGACATTGTTCGTCGGGTTCCATTTTTTGGTCAAATGGATAATCAACTTCTAGATGCAATATGCGAACGGCTTGTTTCATCGTTGAACACAAAAGACACATACATAGTCCGCGAAGGTGATCCTGTGAGAGAGATGCTTTTCATCATCAGAGGGCAAGTAGAGAGTTCCACCACCGATGGTGGAAGAACAGGATTCTACACCTCCATCATCCTCAGACCCGGCGACTTTTGCGGCGAAGAATTGCTAACATGGGCCTTGATGCCCTCTTCAAGCCTTCCATCTTCCACTCAAACTGTCAAGACCTTCACTGAAGTCGAAGCGTTTGCCTTACGAGCCGAAGATCTTAAATTTGTTGCCAGCCAGTTCAAGCGCCTCCATAGCAAGAAACTACAACATGCTTTTAGAAACAAAGAATTTTCTCAGTAG 1722 0.4895 MSSEFHRFAAISAVSSHLSSLPKSFSLRKKVPWWYQIVDPRSRFVARWNRMFLYVCIIALFLDPLYFYFPITGDKACMQTDIVLGVFVTFSRTVADLFFLNHMVLKFRTAFVSPLSRVYGRKELVTDPRQIALRYLKSDFSIDLLATLPLPQIVIWFVIPAVKNSTVAHVNHTLSLIVLIQFIPRLFQIFPLQRRILKTSGLIAKTALAGALYNLGSYMLASHVLGASWYVSSIQRQYECWRITCTNEMNRTHSPSCKPSFLDCGTLGNSERQAWFRRTRVLSKCDALNLKNEFQFGMFADAFTDHVSSSRFFQKYFYCLWWGLKNLRFSNLFFNFFLPHVKFIRTKSSDQHLRWGNNNYLLTSTARVEEWRLKQKDTEEWMNHRQLPLELQQRVRRFVQYKWLATRGVDEESILRALPLDLRRQIQRHLCLDIVRRVPFFGQMDNQLLDAICERLVSSLNTKDTYIVREGDPVREMLFIIRGQVESSTTDGGRTGFYTSIILRPGDFCGEELLTWALMPSSSLPSSTQTVKTFTEVEAFALRAEDLKFVASQFKRLHSKKLQHAFRNKEFSQ 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0961 573 Pfam Ion transport protein 48 327 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Aed10g0961 573 Gene3D Helix hairpin bin 366 431 - -
Aed10g0961 573 ProSiteProfiles cAMP/cGMP binding motif profile. 440 568 IPR000595 -
Aed10g0961 573 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 16-RELATED 13 567 - -
Aed10g0961 573 SMART cnmp_10 440 569 IPR000595 -
Aed10g0961 573 SUPERFAMILY cAMP-binding domain-like 369 562 IPR018490 -
Aed10g0961 573 Pfam Cyclic nucleotide-binding domain 463 549 IPR000595 -
Aed10g0961 573 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 13 567 - -
Aed10g0961 573 CDD CAP_ED 440 567 IPR000595 -
Aed10g0961 573 Gene3D Jelly Rolls 438 556 IPR014710 -
Aed10g0961 573 SUPERFAMILY Voltage-gated potassium channels 39 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0961 Aed-Chr10 8333314 8336439 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0961 36 567 Ion Channels AT3G48010 66.058 0.0 727
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0961 K05391 - gmx:100783672 976.852
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0961 10 8333314 8336439 Aed10g0961 10 8333314 8336439 ECH