Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0960 ATGGCAACTCGAAGACTTTCTTGCTTCCTCTCTCGCTCTTTATCTTCTTTTCAAGCTGCTTCTCTGCTTCACTCACTTGGGAGAAACTCTGGCAAATGGGGAAATATTAACAGATTCAGCACTGCAGCAGTAGTTGAGGAATTAATCACTCCACAAGTTCCAATAACATACACTAAGCATCTTATAAATGGACAATTTGTGGATGCTGCATCAGGGAAAACTTTTCCAACATATGATCCGCGCACAGGAGAAGTGATTGCTCAAGTTGCTGAAGGTGATGCAGAAGATATCAACCGTGCAGTATCAGCAGCTCGAAAGGCCTTTGATGAAGGACCTTGGCCAAAAATGACTGCTTATGAAAGATGTAAGATAATACTGCGCTTTGCTGATTTGGTTGAGAAACACAGTGATGAACTTGCAGCTCTGGAGACATGGAACAGTGGAAAGCCTTATGAACAATCTGCCACTTCTGAATTACCAACGTTTGTGCGTTTGTTTCATTACTATGCTGTGCCTGCTGATGGAAATTATCATGTGCAGACATTGCATGAGCCAATTGGTGTTGCAGGACAAATCATACCATGGAACTTTCCTCTCCTCATGTTTGCTTGGAAAGTTGGACCAGCTCTTGCATGTGGAAATACTGTCATCCTTAAGACTGCTGAACAAACACCTTTAACAGCTCTCTATGTGGCAAAACTTTTTCATGAGGCTGGTCTTCCACCAGGTGTTTTGAATATAGTTTCTGGCTATGGTCCAACTGCTGGTGCAGCTCTAGCAAGTCATATGGATGTTGACAAGCTAGCATTCACTGGATCTACCGAGACTGGAAAAATTGTGCTTGAACTGGCCGCAAGAAGCAATTTGAAGTCTGTGACATTGGAACTTGGAGGGAAATCACCCTTCATAGTGTTTGAGGATGCTGATGTTGACCATGCTGTAGAACTTGCACACTTTGCTCTGTTCTTTAATCAGGGGCAATGTTGCTGTGCTGGATCTCGTACCTTTGTACATGAGCGTGTCTATGATGAGTTCTTAGAGAAAGCAAGGGCTCGCGCTTTGAAACGTGTTGTTGGGGATCCCTTCAAAAAGGGTGTCGAACAAGGTCCTCAGATTGATGTGGAACAATTTCACAAAGTCCTTAGGTACATAAAGTCTGGTATTGAAAGCAATGCTACCCTTGAATGTGGGGGTGACAGAATTGGCTCAAAGGGCTACTTTGTCCAGCCTACTGTCTTCTCAAATGTTCAGGATGACATGTTGATAGCAAAAGATGAAATCTTTGGCCCTGTACAAACCATCCTGAAGTTCAAGGACATTGACGAAGTAATTCGAAGGTCGAATGCAACGAGTTATGGTCTAGCTGCAGGTGTTTTCACAAAGAACGTGCACACAGCCAACACATTGATGCGAGCACTGAGGGTTGGAACAGTGTGGATCAATTGCTTTGATGTTTTTGATGCTGCAATTCCATTTGGAGGGTACAAAATGAGTGGCATCGGGAGGGAGAAGGGTATCTACAGTCTCAACAATTACCTGCAGGTCAAAGCTGTGGTTTCACCACTGAAAAAACCTGCATGGCTTTGA 1587 0.4373 MATRRLSCFLSRSLSSFQAASLLHSLGRNSGKWGNINRFSTAAVVEELITPQVPITYTKHLINGQFVDAASGKTFPTYDPRTGEVIAQVAEGDAEDINRAVSAARKAFDEGPWPKMTAYERCKIILRFADLVEKHSDELAALETWNSGKPYEQSATSELPTFVRLFHYYAVPADGNYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTVILKTAEQTPLTALYVAKLFHEAGLPPGVLNIVSGYGPTAGAALASHMDVDKLAFTGSTETGKIVLELAARSNLKSVTLELGGKSPFIVFEDADVDHAVELAHFALFFNQGQCCCAGSRTFVHERVYDEFLEKARARALKRVVGDPFKKGVEQGPQIDVEQFHKVLRYIKSGIESNATLECGGDRIGSKGYFVQPTVFSNVQDDMLIAKDEIFGPVQTILKFKDIDEVIRRSNATSYGLAAGVFTKNVHTANTLMRALRVGTVWINCFDVFDAAIPFGGYKMSGIGREKGIYSLNNYLQVKAVVSPLKKPAWL 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0960 528 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 2 MEMBER B4, MITOCHONDRIAL 26 528 - -
Aed10g0960 528 CDD ALDH_F2BC 55 519 - -
Aed10g0960 528 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 294 301 IPR029510 GO:0016491
Aed10g0960 528 Pfam Aldehyde dehydrogenase family 66 518 IPR015590 GO:0016491
Aed10g0960 528 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 26 528 - -
Aed10g0960 528 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 322 333 IPR016160 GO:0016491
Aed10g0960 528 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 298 487 IPR016163 GO:0016620
Aed10g0960 528 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 62 516 IPR016162 GO:0016491
Aed10g0960 528 SUPERFAMILY ALDH-like 51 520 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0960 Aed-Chr10 8325638 8330871 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0960 1 528 Aldehyde Dehydrogenase Gene Family AT3G48000 77.180 0.0 880
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0960 K00128 - gmx:100811501 994.186
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0960 10 8325638 8330871 Aed6g1471 6 19069321 19072917 ECH
Aed10g0960 10 8325638 8330871 Aed10g0960 10 8325638 8330871 ECH