Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0956 ATGAAGAAGAGAGTAGCAAGCCCCAGTAATGAGTCCTCTAAAATTGATCGCAAAACCATTGAGAAAAACCGCAGAATTCACATGAAAACCCTTTGTCATCAGCTTTCTTCTCTTATTCCTCCCAGCCTCATCAAACCTGCAAAATCCAAGTTGATGATAGGGCAGCAGGAGCAGCTAGATCTTGCAGCAAGGTATATAAATCACATGACAGAGAGAATAGAGAAACTGAAGAAGCAGAAGGAGCAAATGATGATGAAGTTGTCATCAAAGCAAAGCAATAACGATAATGACACAAAAATGTTGAACAATAATAATGTTGAGTCGAAATTGCCAATACTGGAGCTAAGAGACTTAGGTTCCGGCATCGAAGTGATGTTGGTGAGTGGTTTGAACAAGACATTCATGTTGTACGAAGTCATTAGTGTGCTCCAGGAAGAAGGCGCCGAAGTTGTCAATGCAAGCTTCTCAACTGTAGGCGACAAGATATTTTACGTTGTTCATGCTCAGGTGAAAATATCAAGAGTGGGAGTAGAGACCACAAGGGTATATGATAGACTTCAAGAGTTTATTGCCCCACTAGAAATCTGGCCGGAAGACGTGTGA 603 0.4146 MKKRVASPSNESSKIDRKTIEKNRRIHMKTLCHQLSSLIPPSLIKPAKSKLMIGQQEQLDLAARYINHMTERIEKLKKQKEQMMMKLSSKQSNNDNDTKMLNNNNVESKLPILELRDLGSGIEVMLVSGLNKTFMLYEVISVLQEEGAEVVNASFSTVGDKIFYVVHAQVKISRVGVETTRVYDRLQEFIAPLEIWPEDV 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0956 200 PANTHER TRANSCRIPTION FACTOR BHLH162 10 191 - -
Aed10g0956 200 MobiDBLite consensus disorder prediction 1 20 - -
Aed10g0956 200 Gene3D - 13 96 IPR036638 GO:0046983
Aed10g0956 200 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 16 87 IPR036638 GO:0046983
Aed10g0956 200 Coils Coil 59 93 - -
Aed10g0956 200 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 10 191 IPR015660 GO:0003700|GO:0006357
Aed10g0956 200 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 12 69 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0956 Aed-Chr10 8268022 8269711 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0956 7 190 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 32.979 1.59e-24 93.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aed10g0956 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0956 - - gmx:100790403 294.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0956 10 8268022 8269711 Aed10g0956 10 8268022 8269711 ECH
Aed6g1467 6 19045488 19046363 Aed10g0956 10 8268022 8269711 PCT