Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0950 ATGAAGAACTTGAAGTGGCACAAGCAAATTTCCAACAGTGGGAACAAGCTGGGGAGAAGGCTCTCACTTGGTGAGTATAACCGTGCAGTGTCATGGTCCAAGTATTTGGTGTCTCCAGGGGCTGAGATAAAGGGTGAAGGAGAAGAGGAATGGAGTGCGGATATGTCTCAGTTGCTCATTGGATCCAAATTCGCCTCTGGGAGGCACAGCAGAATCTACAGAGGGGTTTACAAGCACAAAGATGTGGCGATTAAGCTCATAAGTCAGCCGGAGGAGGATGAGGACTTGGCTGCTTTTCTTGAGAAGCAATTCACTTCTGAGGTCTCCTTGCTCCTCAGATTAGGCCACCCTAATATCATTACTTTAATTGCTGCTTGCAAGAAACCTCCAGTGTTTTGCATAATCACTGAATATTTGGCTGGAGTTCTATGGGAGCTTTTGACAGGAAAGACTCCTTTTGACAACATGACACCAGAGCAGGCAGCATATGCTAATGCAAGACCACCACTGCCATCAGAGTGTCCATGGGCATTCAGTGATCTGATAAATCGATGCTGGTCAAGCAACCCTGATAAAAGACCTCATTTTGATGAGATAGTTTCCATTTTGGACCACTACACAGAATCACATGACCAAGATCCTGAGTTTTTCTCAACTTACAACAAACCAAGTCCTTCTACTACCACTAGAACTAGTAACACAATTCTGGGGTGCTTCCCCAAATGCAATGCTCGCCATAAATTTGGTGCTTGCAAAGCTTAA 762 0.4501 MKNLKWHKQISNSGNKLGRRLSLGEYNRAVSWSKYLVSPGAEIKGEGEEEWSADMSQLLIGSKFASGRHSRIYRGVYKHKDVAIKLISQPEEDEDLAAFLEKQFTSEVSLLLRLGHPNIITLIAACKKPPVFCIITEYLAGVLWELLTGKTPFDNMTPEQAAYANARPPLPSECPWAFSDLINRCWSSNPDKRPHFDEIVSILDHYTESHDQDPEFFSTYNKPSPSTTTRTSNTILGCFPKCNARHKFGACKA 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0950 253 PANTHER SERINE/THREONINE-KINASE HT1-LIKE PROTEIN 142 226 - -
Aed10g0950 253 PANTHER SERINE-THREONINE PROTEIN KINASE 142 226 - -
Aed10g0950 253 Pfam Protein tyrosine and serine/threonine kinase 142 203 IPR001245 GO:0004672|GO:0006468
Aed10g0950 253 SUPERFAMILY Protein kinase-like (PK-like) 49 228 IPR011009 -
Aed10g0950 253 Gene3D Transferase(Phosphotransferase) domain 1 139 234 - -
Aed10g0950 253 ProSiteProfiles Protein kinase domain profile. 58 253 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed10g0950 253 Gene3D Phosphorylase Kinase; domain 1 47 138 - -
Aed10g0950 253 Pfam Protein kinase domain 66 141 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed10g0950 253 PANTHER SERINE-THREONINE PROTEIN KINASE 1 141 - -
Aed10g0950 253 PANTHER SERINE/THREONINE-KINASE HT1-LIKE PROTEIN 1 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0950 Aed-Chr10 8210510 8215621 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0950 142 208 MAP Kinase Kinase Kinase AT1G62400 56.338 1.26e-19 85.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Aed10g0950 Pkinase 4.7e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0950 - - gmx:100807757 281.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0950 10 8210510 8215621 Aed10g0950 10 8210510 8215621 ECH
Aed6g1462 6 18925109 18928090 Aed10g0950 10 8210510 8215621 PCT