Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0923 ATGGAGAACAACCCCTACGATGACTTTTACTGTTCAGGCACTTACTCAGACGACCAGACAACATTAATGGCTCCACCTGCGAAGGAAGAAGAGGATGTTTCAAAAGCAGTTCGTGCTAAAGTTGCTTCTCATCCTCTATTTCCTCACCTCCTCCATGCCTACATCGATTGCCACAAGGTGGGAGCGCCGCAAGATGTGGCACAGGTATTAGAAGGAATGAAAGAAGAGCATAGAAGTGGGATGTGTCAGAATAGTCAGATAATATCTGAATCTGATCAAGGCAACTTCTTGGGTGCTGATCCCGAGCTTGATGATTTCATGCACAAATCGGATCTTTCAAGGCCCTTTGATGAGGCAACCATGTTCCTCAGCCACATGGAAACTCAGCTTCACTCCATCTGCACCAACATTAACACTCCTCCTCCTCAACCTGCAGGTTCTCTCTCTCTTTCTCTTTGA 459 0.4641 MENNPYDDFYCSGTYSDDQTTLMAPPAKEEEDVSKAVRAKVASHPLFPHLLHAYIDCHKVGAPQDVAQVLEGMKEEHRSGMCQNSQIISESDQGNFLGADPELDDFMHKSDLSRPFDEATMFLSHMETQLHSICTNINTPPPQPAGSLSLSL 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0923 152 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 29 137 - -
Aed10g0923 152 Pfam KNOX1 domain 36 76 IPR005540 GO:0003677|GO:0005634
Aed10g0923 152 Pfam KNOX2 domain 98 134 IPR005541 GO:0003677|GO:0005634
Aed10g0923 152 SMART KNOX2_2 93 135 IPR005541 GO:0003677|GO:0005634
Aed10g0923 152 SMART KNOX1_2 35 79 IPR005540 GO:0003677|GO:0005634
Aed10g0923 152 PANTHER HOMEOBOX PROTEIN KNOTTED-1-LIKE 6 29 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0923 Aed-Chr10 7799868 7800661 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0923 22 151 Homeobox Transcription Factor Family AT1G70510 39.041 1.40e-25 97.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0923 - - gmx:102662019 177.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0923 10 7799868 7800661 Aed10g0923 10 7799868 7800661 ECH