Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0896 ATGGGTCGCCATTCCTGCTGTTTAAAGCAAAAGCTAAGGAAGGGCTTATGGTCCCCCGAAGAAGATGAGAAGCTTTTCAACTACATAACCAGATTCGGCGTTGGCTGCTGGAGCTCTGTTCCCAAACAAGCCGGACTGCAAAGGTGTGGAAAGAGTTGCAGATTGAGATGGATAAACTACTTGAGGCCTGATTTGAAGAGAGGCATGTTCTCTCAGCAAGAGGAGGATCTTATCATTAGTCTTCACGAAGTTCTAGGAAATAGGTGGGCTCAAATTGCAGCTCAATTGCCAGGGAGAACAGACAACGAGATTAAGAACTTTTGGAATTCATGTTTGAAGAAGAAGCTAATGAAGCAAGGGATTGACCCTGCTACACACAAGCCTCTAAAGGAGGAGAAGGAATTAGCCATATTAATGGAAGCACCACCACCTATGCTATTGCCACTGTCTCAACAAGGAGTTTTGGTTTCAACACAAGAGTCACCACCGCCACTTGTAGTGAACAATAATTCAAATTACTACGAGAATGCTGCTTCTGCTTTAGACCCTTTGTTGTCCTACTTTGAATTTCAAATGGGTTACAACAACCCAATTAGACAATTTGACCAGAACCATGTGGGGACCAACAACAACTCAAGCTACGGATTCTCCTCGTTGCCGTGTCTGAATAGTGTGTCGGTGGCGCCAGAGTTTTCTTCTGATAACAACTCAGCTTCAAAAATCAGTTCTTTGATGAAGGAAAGCTCCAGCAATAGCTCAATTAGCATGAGTGTTTATCATCAAATGAATATGGAAAATGCGGGGTTCTCATGGGATGGTGAGAACAACAATAATAATAATAATAAGATTGGTGATCCTTTGCTACAGTTCCAAGTGAATGTGGTAAAATCTGAAGAGTTCAAGACAAGTTCGTGGCATGAAGGGCAGATTGATCTGACTCAGAATTCCATAGATTTCACTAGCTATCCGTTAATGTCACTGTCTGAGGATCTAACCGGAGCAAATTTTGATGTGTTCCAGCAGTTGTGA 1029 0.4257 MGRHSCCLKQKLRKGLWSPEEDEKLFNYITRFGVGCWSSVPKQAGLQRCGKSCRLRWINYLRPDLKRGMFSQQEEDLIISLHEVLGNRWAQIAAQLPGRTDNEIKNFWNSCLKKKLMKQGIDPATHKPLKEEKELAILMEAPPPMLLPLSQQGVLVSTQESPPPLVVNNNSNYYENAASALDPLLSYFEFQMGYNNPIRQFDQNHVGTNNNSSYGFSSLPCLNSVSVAPEFSSDNNSASKISSLMKESSSNSSISMSVYHQMNMENAGFSWDGENNNNNNNKIGDPLLQFQVNVVKSEEFKTSSWHEGQIDLTQNSIDFTSYPLMSLSEDLTGANFDVFQQL 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0896 342 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Aed10g0896 342 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Aed10g0896 342 PANTHER MYB TRANSCRIPTION FACTOR 1 338 - -
Aed10g0896 342 CDD SANT 70 109 IPR001005 -
Aed10g0896 342 PANTHER MYB DOMAIN PROTEIN 55 1 338 - -
Aed10g0896 342 CDD SANT 17 61 IPR001005 -
Aed10g0896 342 Gene3D - 11 67 - -
Aed10g0896 342 SMART sant 66 114 IPR001005 -
Aed10g0896 342 SMART sant 13 63 IPR001005 -
Aed10g0896 342 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Aed10g0896 342 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Aed10g0896 342 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Aed10g0896 342 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Aed10g0896 342 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Aed10g0896 342 Gene3D - 68 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0896 Aed-Chr10 7504007 7505476 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0896 1 131 MYB Transcription Factor Family AT4G01680 85.496 5.46e-82 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aed10g0896 Myb_DNA-binding 1.9e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0896 K09422 - gmx:100799243 479.559
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0896 10 7504007 7505476 Aed10g0896 10 7504007 7505476 ECH
Aed6g1419 6 18613473 18614902 Aed10g0896 10 7504007 7505476 PCT