Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0894 ATGGCCTCAGCTTCGCAAAAGGCGACGCCACTTCCTCATTCCTCTTCTTGCTGTTCCGCCGCCGATGCTCCAGCACCCGCCGTCATTCCCCGCGTAGCCGCCGCCGCCATCGTTGCGCCGCAAGACTGGACCGCCGCCGCCGCCGACGTTCCCCTCATTTCCTCCACCAATGCATCTGCTGCCAAGCCCGGAGTCGCTGCAATGCCAAGCTTAAGGGCACAGTCAAGCCACCCTTTGGACCCTTTATCTGCTGCTGAAATCTCTGTGGCTGTGGCAACTGTGAGAGCTGCTGGAGCTACTCCTGAGCTTAGAGATAGTATGCGCTTCATTGAAGTAGTTCTACTGGAGCCAGATAAAAATGTTGTTGCACTGGCAGATGCATATTTCTTTCCACCTTTCCAACCGTCATTACTTCCAAGAACTAGAGGAGGGCCTCTGATTCCAGCTAAACTGCCTCCAAGATGCGCTAGACTTGTTGTTTACAATAAGAAAACAAATGAGACTAGTGTATGGATTGTTGAGTTGTCACAAGTACATGCAGTAACTAGAGGTGGTCATCACCGAGGAAAAGTAATTTCATCACATGTTGTTCCTGATGTTCAGCCTCCAATGGATGCCGAGGAATACGCAGAATGCGAAGCTGTTGTCAAAAGTTTCCCCCCATTTATAGAGGCTATGAAGAAAAGGGGTATTGAAGACATGGACCTTGTAATGGTTGATCCCTGGTGTGTTGGTTATTACAGTGAAGCAGATGCTCCTGGGAGAAGACTTGCTAAACCTCTCATATTTTGTCGATCTGAGAGTGACTGCCCTATGGAAAATGGCTATGCTCGCCCAGTTGAGGGCATCTCTGTTCTTGTTGACATGCAAAACATGGTGGTGATAGAGTTTGAAGATTGTAAACTTGTTCCCCTCCCACCAGTTGATCCCTTGAGGAACTATACTTCCGGTGAAACCAGAGGTGGCTCTGATAGAAGTGATGTAAAACCCTTGCAAATTATTCAGCCTGAAGGTCCAAGCTTCCGTGTCAATGGGTATTTTGTTGAATGGCAGAAGTGGAATTTTCGTATTGCATTTACACCCAAAGAAGGTTTGGTTATATATTCTGTTGCATATGTTGATGGTAGTCATGGACGAAGGCCTGTTGCTCATAGGTTGAGTTTTGTGGAGATGGTTGTTCCCTATGGAGATCCAAATGATCCACATTACAGAAAAAATGCTTTTGATGTTGGGGAAGACGGCTTGGGAAAAAATGCACATTCCCTTAAGAAGGGATGTGACTGTTTGGGCTACATCAAGTATTTTGATGCTCACTTCACAAATTTCACTGGTGGAGTGGAAACAATCGAAAATTGTGTATGTTTGCATGAAGAGGATCATGGAATTCTCTGGAAGCATCAAGACTGGAGAACTGGCTTAGCAGAAGCCCGAAGATCCAGAAGACTTACAGTTTCTTTCATATGCACTGTGGCTAACTATGAGTATGGATTTTTTTGGCATTTTTATCAGGCAAGTAGGGATGGAAGGATTGAAGCTGAAGTCAAGCTAACTGGAATTCTCAGCCTAGGAGCCTTGCTGCCTGGAGAGTTTCGAAAATACGGAACCATGATTGCACCTGGTCTATATGCACCAGTTCATCAACATATTTTTGTTGCTCGCATGGACATGTCTGTTGATTCTAAACCTGGTGAAGCTTTGAATCAGGTTGTGGAGGTCAATATGAAGGTCGAGGAACCAGGTGAGAAGAATGTTCACAATAATGCATTCTATGCTGAAGAGACTTTGCTCAGATCTGAATTGGAAGCCATGCGTGATTGCAATTCTTTGACTGCTCGACATTGGATTGTAAGGAACACAAGAACATGCAATAGAACTGGACAGTTGACAGGCTACAAGCTGGTACCTGGCTCAAACTGCTTACCATTGGCAGGCGCTGAAGCCAAGTTTTTAAGAAGAGCTGCTTTCTTGAAGCATAATTTTTGGGTAACAAAATATTCACGCGATGAGATGTTTCCTGGAGGAGAATTTCCTAATCAAAATCCACGTGTTGGTGAAGGACTAGCTACATGGGTTAAGCAGAACCGATCTTTGGAAGAAACTAACACTAACTGTGTTATCTTCAGGTATATATTTGGAATCACACATGTTCCCCGTTTGGAAGACTGGCCTGTTATGCCAGTAGAGCACATTGGTTTTATGCTCACGCCTCATGGATTCTTCAACTGTTCCCCTGCAGTAGATGTTCCGCCTAATGCATGTGAAATGGATTCTAAAGATAATGACATTAAGGATAATGGTTCTTCCAAACCAATTCAGAGTGGGTTAACGGCAAAGCTTTAG 2340 0.4491 MASASQKATPLPHSSSCCSAADAPAPAVIPRVAAAAIVAPQDWTAAAADVPLISSTNASAAKPGVAAMPSLRAQSSHPLDPLSAAEISVAVATVRAAGATPELRDSMRFIEVVLLEPDKNVVALADAYFFPPFQPSLLPRTRGGPLIPAKLPPRCARLVVYNKKTNETSVWIVELSQVHAVTRGGHHRGKVISSHVVPDVQPPMDAEEYAECEAVVKSFPPFIEAMKKRGIEDMDLVMVDPWCVGYYSEADAPGRRLAKPLIFCRSESDCPMENGYARPVEGISVLVDMQNMVVIEFEDCKLVPLPPVDPLRNYTSGETRGGSDRSDVKPLQIIQPEGPSFRVNGYFVEWQKWNFRIAFTPKEGLVIYSVAYVDGSHGRRPVAHRLSFVEMVVPYGDPNDPHYRKNAFDVGEDGLGKNAHSLKKGCDCLGYIKYFDAHFTNFTGGVETIENCVCLHEEDHGILWKHQDWRTGLAEARRSRRLTVSFICTVANYEYGFFWHFYQASRDGRIEAEVKLTGILSLGALLPGEFRKYGTMIAPGLYAPVHQHIFVARMDMSVDSKPGEALNQVVEVNMKVEEPGEKNVHNNAFYAEETLLRSELEAMRDCNSLTARHWIVRNTRTCNRTGQLTGYKLVPGSNCLPLAGAEAKFLRRAAFLKHNFWVTKYSRDEMFPGGEFPNQNPRVGEGLATWVKQNRSLEETNTNCVIFRYIFGITHVPRLEDWPVMPVEHIGFMLTPHGFFNCSPAVDVPPNACEMDSKDNDIKDNGSSKPIQSGLTAKL 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0894 779 Gene3D - 58 204 - -
Aed10g0894 779 Pfam Copper amine oxidase, enzyme domain 331 745 IPR015798 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Aed10g0894 779 Pfam Copper amine oxidase, N3 domain 202 305 IPR015802 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Aed10g0894 779 PANTHER AMINE OXIDASE 50 774 - -
Aed10g0894 779 MobiDBLite consensus disorder prediction 754 779 - -
Aed10g0894 779 Gene3D - 206 309 - -
Aed10g0894 779 PANTHER COPPER AMINE OXIDASE 50 774 IPR000269 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Aed10g0894 779 SUPERFAMILY Amine oxidase N-terminal region 201 318 IPR016182 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Aed10g0894 779 Pfam Copper amine oxidase, N2 domain 77 175 IPR015800 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Aed10g0894 779 SUPERFAMILY Amine oxidase catalytic domain 325 750 IPR036460 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Aed10g0894 779 Gene3D Copper amine oxidase, catalytic domain 317 750 IPR036460 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Aed10g0894 779 SUPERFAMILY Amine oxidase N-terminal region 74 203 IPR016182 GO:0005507|GO:0008131|GO:0009308|GO:0048038
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0894 Aed-Chr10 7486089 7491829 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0894 K00276 - gmx:100798722 1447.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0894 10 7486089 7491829 Aed10g0894 10 7486089 7491829 ECH
Aed6g1418 6 18605489 18609496 Aed10g0894 10 7486089 7491829 PCT