Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0892 ATGAGTATGCAATCCAAACCCGGTCAAACTATCAAGTTCCTCTGTAGCTACGGCGGCAAGATTCTCCCACGCGCCACCGACGGCGAGCTCCGTTACGTCGGCGGTCACACCAGAGTCCTCACCATCGACCGGTCTATTTCCTTCTCAGAATTGATGACGAAGCTTAGCGAGTTTTGTGGTTCGTCTGTGATCTTGCGGTGCCAGTTGCCGAAGGCAGACTTGGAGACCTTGATCTCCGTCAAAAACGACGAAGATCTCGCTAGCATAATCGAAGAGTACGACCGCGCATCGTTGAAATTGGCGCATCCGTTGAAGATCAAAGCCGTTCTCTCGCCGCCGAAGTCGATGAAGAAGCCTTCGTCTGCTCCGTCGGCGGCGTCGTCGGTGTCGTCCAGCGCCAGCCACTCTTCGTCGTGCAGATCGCCGCACACCTCCACCGAATCGCTGCCGTACCGCATCGGGCGGCATCACCGGAGTCTGGCTCCGCCGGCTGCGTACGCTATCGGCGCCCGTAACGGCTCGGCGAAGGCTTGTTGCTACACGCATATCGATAGAAGCCCTAGGTTTCTGTATCGAGGACCTCGCTGCAATTACTACTGCCACTGA 606 0.571 MSMQSKPGQTIKFLCSYGGKILPRATDGELRYVGGHTRVLTIDRSISFSELMTKLSEFCGSSVILRCQLPKADLETLISVKNDEDLASIIEEYDRASLKLAHPLKIKAVLSPPKSMKKPSSAPSAASSVSSSASHSSSCRSPHTSTESLPYRIGRHHRSLAPPAAYAIGARNGSAKACCYTHIDRSPRFLYRGPRCNYYCH 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0892 201 Gene3D - 31 109 - -
Aed10g0892 201 PANTHER OS05G0427100 PROTEIN-RELATED 4 199 - -
Aed10g0892 201 CDD PB1_UP2 14 101 - -
Aed10g0892 201 Pfam PB1 domain 29 99 IPR000270 GO:0005515
Aed10g0892 201 SUPERFAMILY CAD & PB1 domains 27 116 - -
Aed10g0892 201 PANTHER PB1 DOMAIN PROTEIN 4 199 - -
Aed10g0892 201 SMART PB1_new 25 113 IPR000270 GO:0005515
Aed10g0892 201 MobiDBLite consensus disorder prediction 112 153 - -
Aed10g0892 201 MobiDBLite consensus disorder prediction 117 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0892 Aed-Chr10 7455920 7458398 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0892 12 92 MAP Kinase Kinase Kinase AT2G35050 51.852 1.66e-24 98.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0892 - - gmx:100810563 272.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0892 10 7455920 7458398 Aed10g0892 10 7455920 7458398 ECH
Aed6g1411 6 18567694 18569219 Aed10g0892 10 7455920 7458398 PCT