Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0881 ATGCCGCCGGAATCCTCCGAGCAAGACCTCGACGATCCCGACCTCGAGTTCGTCGAGGTTGATCCCACAGGTCGCTATGGTCGGTACAAGGAAGTTTTAGGGAAAGGGGCTTTCAAGAAACAAGGAATCGTTTTGGGGGGGGGGGGGAATTTTTGTTTGCCCTTAACTGTGAAATGGGAATGTAGATATCGAGCTTTTGATGAGTTGGAAGGGATTGAAGTGGCTTGGAATCAGGTGAAGGTGGCGGATCTGTTGCGAAACTCCGAAGATTTGGAGCGACTTTATTCAGAGGTTCATTTGCTCAAGACTTTGAAGCATAAGAATATTATTAAGTTTTACAATTCATGGGTTGACACCAACAATGAAAACATCAACTTCATTACTGAAATTTTCACCTCAGGAACATTGCGTCAATACCGGAAGAAACACAAGAATGTTGATTTGAGAGCTGTGAAGAAATGGTCTAGGCAGATTTTGGAAGGCCTTTTATATCTTCATGGTACCCCTGAGTTCATGGCCCCAGAACTTTATGAAGAAGAATACAACGAGCTTGTTGATATCTATGCTTTTGGCATGTGCATGCTAGAGTTGGTAACCGTTGAGTACCCGTATGTTGAATGTACCAATGCTGCTCAAATATACAAGAAAGTGACATCTGGAAAAAAGCCCGCATCATTGGAAAAGGTGACAGATCCTGAAGTTAAAGCATTTATTGAAAAGTGTATCGCTCATGTATCTGAACGGTTGTCTGCGAAGGACCTCTTAATGGATCCATTCCTTCAGTCAGATCATGATAATGAAAGTGTAGGTCGATCTTCAAGATCTCAAACCCATCATTCAGGAAATAATTCTCATAATCAAGCTATTGCTGTGGACAATTCTGTTGAGATAAGTAGGGAATTCACGGTTGAAGGTCAGAGGAGAGATAATCGCACAATATTTTTAAAATTGCGAATTGCAGATTCCTCAGACACTTCAAACTCTGTTGCTAGTGAAATGGTTGAGGAGTTGGAACTTACTGATCAAGATGTTACAACTATTGCCAGTATGATTGACTCTGAAATTCAATATCACATTCCTAGTTGGAATTTCGGTGATACTCCTCTTGACATTAATGGTCAAGATTCAGTCTGTATCCCTGAAACTAGGCCAGACGCATCTCCTATGAAAATTGATTCCATTGGTTCTCCTGGAAGTCTTGCATTAGAAGTATTACCTTCAGGTCGTAAGTACTGGTCAGATTCACCAAAGGGAGGTGGTGGAGTTGTAAATGTTCTATCTCGGCATCTTACTTCAAACTTCGGGAATGAAGCATGTGCAAACTCCGAGGAAGGAAGCCCAACTGCAAATGGTGATATTTCAGCTGATGATTGTGTTGATGGTACTGCTGAGAAGGAATGTGATGAGATTGCTAATTCCCCTTCCAGTGTAATAAGTATTGCATCAGAAACAACCAGTGAAAAATCTACTCAGAAAGAAATATCTCTAAGCCTGAAAGATTCTGAAACAGAATACATCAATGAAATAGCAACAAAACTGGAGAATTTGTTGGTTAAACAAAGAGAGGAGTTAGATGAACTAGAGAGGAAGCACAAATTGGCTGTCTCAGATATTTTGAAGGAACTTCCTCTAGAAATGTGCCAGAAGGTCCTAAATATATGCAACCTGCAGATGCCCGACGATGAAATGGCGAGGCTTGCCCTTCATTAA 1710 0.4117 MPPESSEQDLDDPDLEFVEVDPTGRYGRYKEVLGKGAFKKQGIVLGGGGNFCLPLTVKWECRYRAFDELEGIEVAWNQVKVADLLRNSEDLERLYSEVHLLKTLKHKNIIKFYNSWVDTNNENINFITEIFTSGTLRQYRKKHKNVDLRAVKKWSRQILEGLLYLHGTPEFMAPELYEEEYNELVDIYAFGMCMLELVTVEYPYVECTNAAQIYKKVTSGKKPASLEKVTDPEVKAFIEKCIAHVSERLSAKDLLMDPFLQSDHDNESVGRSSRSQTHHSGNNSHNQAIAVDNSVEISREFTVEGQRRDNRTIFLKLRIADSSDTSNSVASEMVEELELTDQDVTTIASMIDSEIQYHIPSWNFGDTPLDINGQDSVCIPETRPDASPMKIDSIGSPGSLALEVLPSGRKYWSDSPKGGGGVVNVLSRHLTSNFGNEACANSEEGSPTANGDISADDCVDGTAEKECDEIANSPSSVISIASETTSEKSTQKEISLSLKDSETEYINEIATKLENLLVKQREELDELERKHKLAVSDILKELPLEMCQKVLNICNLQMPDDEMARLALH 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0881 569 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 62 167 - -
Aed10g0881 569 PANTHER SERINE/THREONINE-PROTEIN KINASE-RELATED 62 167 - -
Aed10g0881 569 ProSiteProfiles Protein kinase domain profile. 27 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed10g0881 569 Gene3D Phosphorylase Kinase; domain 1 11 129 - -
Aed10g0881 569 MobiDBLite consensus disorder prediction 273 290 - -
Aed10g0881 569 Pfam Protein kinase domain 64 166 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed10g0881 569 Pfam Protein kinase domain 167 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed10g0881 569 PANTHER SERINE/THREONINE-PROTEIN KINASE-RELATED 167 560 - -
Aed10g0881 569 PANTHER SERINE/THREONINE-PROTEIN KINASE-RELATED 6 40 - -
Aed10g0881 569 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 6 40 - -
Aed10g0881 569 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 167 560 - -
Aed10g0881 569 SUPERFAMILY Protein kinase-like (PK-like) 63 265 IPR011009 -
Aed10g0881 569 Coils Coil 510 537 - -
Aed10g0881 569 MobiDBLite consensus disorder prediction 264 290 - -
Aed10g0881 569 Gene3D Transferase(Phosphotransferase) domain 1 166 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0881 Aed-Chr10 7374130 7378318 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0881 12 369 MAP Kinase Kinase Kinase AT3G51630 43.262 5.07e-107 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Aed10g0881 Pkinase 5.3e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0881 K08867 - gmx:100272204 832.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0881 10 7374130 7378318 Aed10g0881 10 7374130 7378318 ECH