Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0875 ATGGCTTCACTATTGTCAGTTCTGAAGCAATTGCCATATGAACTAAGTTCAACCCATTGCATAACTGTTTTCTTCAGCTTCCTAAGCTTCTTGTTTCTGCTTAAGCTAAGAAGAAGAAGAAGAAGAAGAAACAAGACATGCAAATTGCCACCATCCCCACCAAAGCTACCCATAATCGGAAATCTTCACCAGTTAGGAACACTTCAACACCGCTCCTTCCAATCACTATCACAAAAATATGGGCCTCTCATGATGCTGCAATTGGGTCAAATTCCAACCCTCGTGGTCTCCTCAGCTGACGTGGCAAGAGAAGTAATAAAAAACCATGACATTGTTTTCTCCAACCGACCACAACCTACGGCGGCCAGAATCTTTGTCTATGGATGCAAGGACGTGGGTTTCGCGCCCTACGGCGAGGAGTGGAGACAAAAGAAGAAGACATGTGTTGTCGAGCTTTTGAGCCTGAAAAAGGTGCGATCTTTTTACTCCATTCGACAGGAAGTTGTTGCAGACTTGGTCGAAGCTATACGTAGTAGTGAAAGACCGTGTGTGAATCTTACTGAGATTCTGATTGCAGCTTCGAGAAACATTGTGTCAAGATGTGTTATTGGAAGGACGTGTGATGATGACACAGTAGTGGGTGGTAATGGTCATAGCATGAAAAATTGCAGCTTTGGAGAGCTGGGAAGAAAGATTATGAGACTGTTCTCGGCTTTCAGCGTGGGTGATTTCTTCCCTTCGTTGGGTTGGGTTGATTCTCTCACTGGTCTAATTCCAGAAATGAAGGCCACTTTTGTTGCAGTAGATTCTTTCTTTGATGAGGTGATTGCAGAACACAAGAGCGGTGCAAGGAAGAGTGATGACTCCTTCATGGGGATACTCCTTCAACTTCAAGACTCTGGAATGCTTGATTTTCAACTTAATAGTGACAACCTCAAAGCAATCCTAATGGACATGGTAATAGGAGCGAGTGACACTATTTCGACAGCTTTGGAATGGACTTTTGCGGAGCTTCTTAGGAATCCAAATACTATGAAGAAAGCTCAAGAAGAGGTAAGAAGAGTTGTTGGAATCAATTCAAGATCAGCAGTACTGGATGAAAATTGTGTGAGTCAAATGAAGTACTTGAAATGTGTAATCAAAGAAACATTGAGATTACATCCACCCAATCCTCTTTTGGTTGCTCGAGAGACGTCATCTAGTGTAAAACTAAGAGGGTACGATATTCCCGCCAAAACAAGGGTATTTATCAATGCATGGACAATTCAAAGGGATCCTGAATCATGGGACAATCCTGAAGAGTTTATTCCCGAAAGATTTGAAAGTAGCCAAGTTGATCTTAATGGACAAGATTTTCAATTTATCCCGTTTGGTATTGGGAGAAGAGGGTGTCCAGCAATTTCATTTGGGCTTGCTTCAACAGAGTATGTTCTTGCTAATCTTTTGTATTGGTTCAATTGGAAGATGATTTCTGAGTCTGGTGTATTAATGCATACCATTGACATGAGTGAGATGAATGGACTCACTGTCAGCAAGAAAGTGCCACTTCATCTTCAACCAGAACCTTATATAACATGA 1578 0.4189 MASLLSVLKQLPYELSSTHCITVFFSFLSFLFLLKLRRRRRRRNKTCKLPPSPPKLPIIGNLHQLGTLQHRSFQSLSQKYGPLMMLQLGQIPTLVVSSADVAREVIKNHDIVFSNRPQPTAARIFVYGCKDVGFAPYGEEWRQKKKTCVVELLSLKKVRSFYSIRQEVVADLVEAIRSSERPCVNLTEILIAASRNIVSRCVIGRTCDDDTVVGGNGHSMKNCSFGELGRKIMRLFSAFSVGDFFPSLGWVDSLTGLIPEMKATFVAVDSFFDEVIAEHKSGARKSDDSFMGILLQLQDSGMLDFQLNSDNLKAILMDMVIGASDTISTALEWTFAELLRNPNTMKKAQEEVRRVVGINSRSAVLDENCVSQMKYLKCVIKETLRLHPPNPLLVARETSSSVKLRGYDIPAKTRVFINAWTIQRDPESWDNPEEFIPERFESSQVDLNGQDFQFIPFGIGRRGCPAISFGLASTEYVLANLLYWFNWKMISESGVLMHTIDMSEMNGLTVSKKVPLHLQPEPYIT 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0875 525 PANTHER CYTOCHROME P450 71B11-RELATED 16 522 - -
Aed10g0875 525 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 457 466 IPR017972 GO:0005506|GO:0016705
Aed10g0875 525 Pfam Cytochrome P450 50 500 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed10g0875 525 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 16 522 - -
Aed10g0875 525 PRINTS P450 superfamily signature 322 339 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed10g0875 525 PRINTS P450 superfamily signature 378 389 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed10g0875 525 PRINTS P450 superfamily signature 455 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed10g0875 525 PRINTS E-class P450 group I signature 101 122 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed10g0875 525 PRINTS E-class P450 group I signature 193 211 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed10g0875 525 PRINTS E-class P450 group I signature 331 357 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed10g0875 525 PRINTS E-class P450 group I signature 377 395 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed10g0875 525 PRINTS E-class P450 group I signature 418 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed10g0875 525 PRINTS E-class P450 group I signature 454 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed10g0875 525 PRINTS E-class P450 group I signature 464 487 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed10g0875 525 PRINTS E-class P450 group I signature 77 96 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed10g0875 525 PRINTS E-class P450 group I signature 311 328 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed10g0875 525 Gene3D Cytochrome P450 34 521 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed10g0875 525 SUPERFAMILY Cytochrome P450 50 522 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0875 Aed-Chr10 7329673 7331414 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0875 27 525 Cytochrome P450 AT3G48280 41.200 3.59e-139 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0875 K20617 - gmx:100792382 794.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0875 10 7329673 7331414 Aed10g0875 10 7329673 7331414 ECH
Aed6g1397 6 18499871 18502708 Aed10g0875 10 7329673 7331414 PCT