Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0874 ATGCACTTCTTCACGAGAATTCTAACCAAAGGAAAAATGGCTCTTCTATCATCAGTCCTAAAGCAATTGCCAAATACTGAGCTAAGTTCAATCAATTATCTAACAGTTTTCTTCTGCTTCGTGAGCCTCCTGCTTATGGTTAAGCTAATAAGAAGAAACCAGACATGCAAATTGCCACCATCCCCACCAAAGCTACCCATAATCGGAAATCTTCACCAGTTAGGAACACTTCCACACCGCTCCTTCCAATCACTCTCACAAAAATATGGGTCTCTCATGATGCTGCAATTGGGTCAAATTCCAACCCTCGTGGTCTCCTCAGCTGACGTGGCAAGAGAAGTAATAAAAAACCATGACATTGTTTTCTCCAACCGACCACAACCTACGGCGGCCAGAATCTTTGTCTATGGATGCAAGGACGTGGGTTTCGCGCCCTACGGCGAGGAGTGGAGACAAAAGAAGAAGACATGTGTTGTCGAGCTTCTGAGCCTGAAAAAGGTGCGATCTTTTTACTCCATTCGACAAGAAGTTGTTGCAGACTTGGTCGAAGCTATACGTAGTAGTGAAAGACCGTGTGTGAATCTTACTGAGATGCTGATTTCAGCTTCGAGCAACATTGTGTCAAGATGTGTTATTGGAAGGAAGTGTGATGATGACACAGTAGTGGGTGGTAATGGTCATAGCATGAAAAATTGCAGCTTTGGAGAGCTGGGAAGAAAGATTATGAGACTGTTCTCGGCTTTCAGCGTGGGTGATTTCTTCCCTTCGTTGGGTTGGGTTGATTCTCTCACTGGTCTAATTCCAGAAATGAAGGCCACTTTTGTTGCAGTAGATTCTTTCTTTGACGAGGTGATTGCAGAACACAAGAGCGGTGCCAGGATGAGTGATGACTCCTTCATGGGGATACTCCTTCAACTTCAAGACTCTGGAATGCTTGACTTTCACCTCAATAGTGACAACCTCAAAGCAATCCTAATGGTTTTCCTCTTTCTCTGTTTATTTGACATGATAATAGGAGGGAGTGACACTACTTCGACAACTTTGGAATGGGCTTTTGCGGAGCTTCTTAGGAATCCAAATACTATGAAGATAGTTCAAGAAGAGGTAAGAAGAGTTGTTGGAATCAATTCAAGATCAGCAGTACTGGATGAAAATTGTGTGAGTCAAATGAAGTACTTGAAATGTGTAATCAAAGAAACAATGAGATTACATCCACCCATTCCTCTTTTGATTGCTCGAGAGACGTCATCTAGTATAAAACTAAGAGGGTACGATATTCCCGCAAAAACAATGGTATTTATGAATGCATGGGCAATGCAGAGAGATCCTGAATTATGGGATAATCCTGAAGAGTTCATTCCTGAAAGATTTGAAAGTAGCCAAGTTGATCTTAATGGACAAGATTTTCAATTAATCCCGTTTGGTACTGGGAGAAGAGGGTGTCCAGCAATTTCATTTGGGCTTGCTTCAACAGAGTATGTTCTTGCTAATCTTTTGTATTGGTTCAATTGGAAGATGATTTCTGAGTCTGGTGTATTAATGCATACCATTGACATGAGTGAGATGAATGGACTCACTGTCAGCAAGAAAGTGCCACTTCATCTTCAACCAGAACCTTATATAACATGA 1629 0.418 MHFFTRILTKGKMALLSSVLKQLPNTELSSINYLTVFFCFVSLLLMVKLIRRNQTCKLPPSPPKLPIIGNLHQLGTLPHRSFQSLSQKYGSLMMLQLGQIPTLVVSSADVAREVIKNHDIVFSNRPQPTAARIFVYGCKDVGFAPYGEEWRQKKKTCVVELLSLKKVRSFYSIRQEVVADLVEAIRSSERPCVNLTEMLISASSNIVSRCVIGRKCDDDTVVGGNGHSMKNCSFGELGRKIMRLFSAFSVGDFFPSLGWVDSLTGLIPEMKATFVAVDSFFDEVIAEHKSGARMSDDSFMGILLQLQDSGMLDFHLNSDNLKAILMVFLFLCLFDMIIGGSDTTSTTLEWAFAELLRNPNTMKIVQEEVRRVVGINSRSAVLDENCVSQMKYLKCVIKETMRLHPPIPLLIARETSSSIKLRGYDIPAKTMVFMNAWAMQRDPELWDNPEEFIPERFESSQVDLNGQDFQLIPFGTGRRGCPAISFGLASTEYVLANLLYWFNWKMISESGVLMHTIDMSEMNGLTVSKKVPLHLQPEPYIT 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0874 542 Pfam Cytochrome P450 59 517 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed10g0874 542 PRINTS P450 superfamily signature 339 356 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed10g0874 542 PRINTS P450 superfamily signature 395 406 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed10g0874 542 PRINTS P450 superfamily signature 472 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed10g0874 542 PRINTS E-class P450 group I signature 202 220 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed10g0874 542 PRINTS E-class P450 group I signature 348 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed10g0874 542 PRINTS E-class P450 group I signature 435 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed10g0874 542 PRINTS E-class P450 group I signature 394 412 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed10g0874 542 PRINTS E-class P450 group I signature 86 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed10g0874 542 PRINTS E-class P450 group I signature 110 131 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed10g0874 542 PRINTS E-class P450 group I signature 328 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed10g0874 542 PRINTS E-class P450 group I signature 481 504 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed10g0874 542 PRINTS E-class P450 group I signature 471 481 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed10g0874 542 PANTHER CYTOCHROME P450 71B11-RELATED 28 539 - -
Aed10g0874 542 SUPERFAMILY Cytochrome P450 59 539 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed10g0874 542 Gene3D Cytochrome P450 46 538 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed10g0874 542 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 474 483 IPR017972 GO:0005506|GO:0016705
Aed10g0874 542 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 28 539 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0874 Aed-Chr10 7321720 7323477 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0874 40 542 Cytochrome P450 AT3G48280 40.873 5.46e-136 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0874 K20617 - gmx:100792382 822.387
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0874 10 7321720 7323477 Aed6g1391 6 18450396 18453771 PCT