Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0873 ATGGCTCTTCCATCATCAGTCCAAAAGCAATTGCCAAATATTGAGCTAAGTTCAACCAATTACCTAACAGTTTTCTTCTGCTTCGTGAGCCTCCTGCTTATGGTTAAGCTAATAAGAAGAAACAAGACATGCAAATTGCCACCATCCCCACCAAAGCTACCCATAATTGGAAATCTTCATCAGCTAGGAACACTGCCACACCGTTCTTTCCATGCACTCTCTCGCAAATATGGGCCTCTCATGATGCTGCAATTGGGCCAAATTCCAACACTCGTGGTCTCGTCTGTTGACGTGGCAAGAGAAGTAATAAAAAAACATAATATTGTTTTCTCCAACCGGCCACAACTTACGGCTGCTAAAATATTTGTCTATGGATGCAAGGATGTGGTTTTTTCAAACTACGGCGAAGAGTGGAGACAAAAGAAGAAGACATGCGTGGTCGAGCTTTTGAGCCAGAAGAAGGTGCGGTCGTTTTGTTCTATCCGAGAAGAAGTTGTTGCAGAGTTGGTGGAAGCTATACGTGGCAGCGAAAGCCCGTGTGTGAATCTGAGTGAGTTGCTGATTGCGGCTTCGAACAACATCGTGTCTCGATGCGTTATTGGAAGGAAGTGTGATGATAGAATAGGTGGTAGTAGCAGTAGTTGCAGCTTTGGAGTGGTGGCAAGAAAGGCCACATTTGTTGCAATAGACGCTTTCCTTGACGAGGTTATTTCAGAATACGAGAGCGGTGCAAGGAAGAGTGATGACTCCTTCATGGGGATACTCCTTCAACTTCAAGACTCTGGGAACCTTGACTTTCACCTCAATCGTGACAACCTCAAAGCAATCCTAATGATCACTTTCTTTATCTATCTATCTATTGACACTACTTCAACAACTTTGGAATGGGCTTTTGCGGAACTCCTTAGGAAACCAAGTACGATGAAGAAAGCTCAAGAAGAGGTAAGAAGAGTTGTGGGAATCAATTCTAGATCAGAAGTACTGGATGAAAATTGTGTGAATCAAATGAACTACTTGAAATGTGTCGTCAAAGAAACTTTGAGATTACATCCACCCGCTCCTCTTTTGCCTCGAGAGACGACATCTAGTACTGTGAAACTAAGAGAGTATGATATTCCCGCCAAAACATGGGTATTCATCAATGCATGGGCAATCCAGAGGGATCCTGAATTATGGGACAATCCTGAAGAGTTCATTCCCGAAAGATTTGAAATTAACCAAGTTGATCTGACAGGACAAGATTTTCATTTGATACCTTTTGGTATTGGGAGAAGGGCGTGTCCTGGAGTTTCATTTGGGCTTGTTTCAACTGAGTATGTTCTTTCTAATCTTCTATATTGGTTCCAATGGAAGATGCCTGAGACTGAGTCTGGTGTATTGATGGAGAACATTGACATGAGTGAGACGAATGGAATCACTGTCAGCAAGAAAATGCCACTTCATCTTCAACCAGAACCTTATATAACATGA 1470 0.4259 MALPSSVQKQLPNIELSSTNYLTVFFCFVSLLLMVKLIRRNKTCKLPPSPPKLPIIGNLHQLGTLPHRSFHALSRKYGPLMMLQLGQIPTLVVSSVDVAREVIKKHNIVFSNRPQLTAAKIFVYGCKDVVFSNYGEEWRQKKKTCVVELLSQKKVRSFCSIREEVVAELVEAIRGSESPCVNLSELLIAASNNIVSRCVIGRKCDDRIGGSSSSCSFGVVARKATFVAIDAFLDEVISEYESGARKSDDSFMGILLQLQDSGNLDFHLNRDNLKAILMITFFIYLSIDTTSTTLEWAFAELLRKPSTMKKAQEEVRRVVGINSRSEVLDENCVNQMNYLKCVVKETLRLHPPAPLLPRETTSSTVKLREYDIPAKTWVFINAWAIQRDPELWDNPEEFIPERFEINQVDLTGQDFHLIPFGIGRRACPGVSFGLVSTEYVLSNLLYWFQWKMPETESGVLMENIDMSETNGITVSKKMPLHLQPEPYIT 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0873 489 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 15 223 - -
Aed10g0873 489 PRINTS P450 superfamily signature 418 427 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed10g0873 489 PRINTS P450 superfamily signature 285 302 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed10g0873 489 PRINTS P450 superfamily signature 341 352 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed10g0873 489 Gene3D Cytochrome P450 38 482 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed10g0873 489 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 223 486 - -
Aed10g0873 489 PANTHER CYTOCHROME P450 71B11-RELATED 15 223 - -
Aed10g0873 489 PANTHER CYTOCHROME P450 71B11-RELATED 223 486 - -
Aed10g0873 489 SUPERFAMILY Cytochrome P450 47 486 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed10g0873 489 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 420 429 IPR017972 GO:0005506|GO:0016705
Aed10g0873 489 Pfam Cytochrome P450 228 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed10g0873 489 Pfam Cytochrome P450 47 205 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed10g0873 489 PRINTS E-class P450 group I signature 381 405 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed10g0873 489 PRINTS E-class P450 group I signature 98 119 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed10g0873 489 PRINTS E-class P450 group I signature 294 320 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed10g0873 489 PRINTS E-class P450 group I signature 427 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed10g0873 489 PRINTS E-class P450 group I signature 74 93 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed10g0873 489 PRINTS E-class P450 group I signature 340 358 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed10g0873 489 PRINTS E-class P450 group I signature 417 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0873 Aed-Chr10 7317290 7318957 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0873 28 489 Cytochrome P450 AT3G48280 40.246 3.57e-122 364
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0873 - K20617 gmx:100792382 704.131
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0873 10 7317290 7318957 Aed10g0873 10 7317290 7318957 ECH