Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aed10g0864 | ATGCCTCGGAAAACTCAACCTTTTCTCTGTTTTTCACTCTTTTTTCTCTTCTCAATCTCCATCGACGCGAAACTTGATCTCTACCCTTCAGATTACAAGGCGCTCTTAACTCTGCATAAGGACCTCGGAGTCAACGATCAACTGGATGCAACTGAGGCGTGCGAAACAGAGGGCGTGTTCTGCGAGCGGAGGCTCTCCGGCAAGGAAACCTACGCGCTCCGAATCACAAGACTCGTCTTCAAATCGAAACAACTAAATGGTGTGCTGTCCCCTTCCATAGGACGTCTCACGGAGCTCAAAGAGCTATCTCTCTCCGACAACCACCTCGTTGACCGAGTCCCTCCCCAAATCGTTGACTGCCGAAAGCTCGAAATCCTCGACCTCGCCAACAACCAATTCTCCGGCGAGGTCCCCTCCGAATTATCCTCCCTCACGCGCCTCCGCACGTTGGACATCTCAACCAACAGACTCTCCGGCAACCTCAACTTCCTCAAGTACTTCCCCAATCTTGAAACGCTCTCCGTCGCGGAAAATCTCTTCACCGGAAGAGTCCCTCCCTCCGTCCGCTCCTTCCGCAACCTCCGCCACTTCAACTTCTCCGGCAACCGCTTCCTCGACCCCTCTCTGCAATCATTATCCTCAATCTCATCCTCGAGACGCTTTCTACTAGACGATGGTGATGGTGATGTTCCCGCTCCCGCTCCTGCACCTATTAACGCACACAGGAAAAAATCCAATACTTCTGGTCATGCTGCTGCTGCTGCACCTGGTCCTGCACCTCACCGTATTAAACACAAACACAGTAAGAGAAAACTCTTAGGGTGGATTCTCGGGTTTGTTGCAGGAGCACTAGCTGGAACCTTATCAGGTTTGGTGTTCTCTCTATTATTCAAACTCGCCTTAGCGATGATCAAGGGAAGAGGGAGAAAAGCTGGACCTGACATCTACAGTCCATTGATAAAAAAAGCAGAGGATTTAGCCTTCCTGGAGAAAGAAGACGGAATCGCTTCTTTACAACTCATTGGACGCGGTGGCTGCGGAGAGGTTTACAAGGCGGAGTTGCCAGGAAGCAACGGGAAAATGATTGCTATAAAGAAAATCGTTCAGCCTCCGAAAGACGGAGCAGAGTTAGCAGAGGAAGACAGCAAAGTGCTCCACAAGAAAATGAGGCAAATCCGATCGGAGATAAACACTGTAGGACAAATCAGACACAGAAACCTTCTGCCTCTTCTGGCGCACGTGTCTAGACCTGATTGCCACTACCTTGTCTACGAATTCATGAAGAACGGAAGCTTGCAGGACACTCTCAGCAACGTCGAGAAAGGCGAGGGCGAGTTGGATTGGCTGTCAAGGCACAAGATCGCGCTCGGTGTGGCTGCCGGACTCGAATATCTTCACCTGAGTCACAGCCCTCGAATCATCCATAGGGATCTCAAGCCTGCTAATATTCTCCTCGACGATGACATGGAGGCAAGAATCGCGGATTTCGGACTCGCCAAGGCAATGCCGGACTACCAGACTCACATAACGACCTCAAACGTGGCGGGAACTGTCGGGTACATAGCCCCCGAGTATCACCAGATACTTAAGTTCACTGATAAGTGTGATATCTACAGCTTCGGGGTTATCCTCGGGGTGTTGGTGATTGGGAAGCTTCCTTCTGATGAGTTCTTTCAGCACACCGAAGAGGTGAGTTTGGTCAAGTGGATGCGGAAGGTCTTGAGTTCTGAGAATCCAAAGGAGGCTATTGACAGAAAGCTGCTCGGGAATGGGTTTGAGGAGCAGATGCTTCTGGTTTTGAAGATTGCTTGCTTTTGCACCATGGATGATCCTAAGGAGAGGCCTAACAGTAAGGATGTTAGGTGCATGCTGTCACAGATTAAGCACTGA | 1890 | 0.5042 | MPRKTQPFLCFSLFFLFSISIDAKLDLYPSDYKALLTLHKDLGVNDQLDATEACETEGVFCERRLSGKETYALRITRLVFKSKQLNGVLSPSIGRLTELKELSLSDNHLVDRVPPQIVDCRKLEILDLANNQFSGEVPSELSSLTRLRTLDISTNRLSGNLNFLKYFPNLETLSVAENLFTGRVPPSVRSFRNLRHFNFSGNRFLDPSLQSLSSISSSRRFLLDDGDGDVPAPAPAPINAHRKKSNTSGHAAAAAPGPAPHRIKHKHSKRKLLGWILGFVAGALAGTLSGLVFSLLFKLALAMIKGRGRKAGPDIYSPLIKKAEDLAFLEKEDGIASLQLIGRGGCGEVYKAELPGSNGKMIAIKKIVQPPKDGAELAEEDSKVLHKKMRQIRSEINTVGQIRHRNLLPLLAHVSRPDCHYLVYEFMKNGSLQDTLSNVEKGEGELDWLSRHKIALGVAAGLEYLHLSHSPRIIHRDLKPANILLDDDMEARIADFGLAKAMPDYQTHITTSNVAGTVGYIAPEYHQILKFTDKCDIYSFGVILGVLVIGKLPSDEFFQHTEEVSLVKWMRKVLSSENPKEAIDRKLLGNGFEEQMLLVLKIACFCTMDDPKERPNSKDVRCMLSQIKH | 629 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aed10g0864 | 629 | SUPERFAMILY | L domain-like | 73 | 221 | - | - | |
Aed10g0864 | 629 | Gene3D | Ribonuclease Inhibitor | 30 | 160 | IPR032675 | - | |
Aed10g0864 | 629 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR-LIKE KINASE | 6 | 629 | - | - | |
Aed10g0864 | 629 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 473 | 485 | IPR008271 | GO:0004672|GO:0006468 | |
Aed10g0864 | 629 | SMART | serkin_6 | 335 | 628 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Aed10g0864 | 629 | PANTHER | PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA | 6 | 629 | - | - | |
Aed10g0864 | 629 | Pfam | Protein kinase domain | 338 | 619 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Aed10g0864 | 629 | MobiDBLite | consensus disorder prediction | 232 | 263 | - | - | |
Aed10g0864 | 629 | CDD | STKc_IRAK | 341 | 627 | - | - | |
Aed10g0864 | 629 | Gene3D | Transferase(Phosphotransferase) domain 1 | 427 | 629 | - | - | |
Aed10g0864 | 629 | ProSiteProfiles | Protein kinase domain profile. | 335 | 629 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Aed10g0864 | 629 | Gene3D | Ribonuclease Inhibitor | 161 | 227 | IPR032675 | - | |
Aed10g0864 | 629 | Gene3D | Phosphorylase Kinase; domain 1 | 326 | 426 | - | - | |
Aed10g0864 | 629 | SUPERFAMILY | Protein kinase-like (PK-like) | 331 | 624 | IPR011009 | - | |
Aed10g0864 | 629 | Pfam | Leucine rich repeat | 98 | 157 | IPR001611 | GO:0005515 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aed10g0864 | Aed-Chr10 | 7244937 | 7246826 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aed10g0864 | 9 | 629 | Receptor kinase-like Gene Family | AT2G31880 | 63.133 | 0.0 | 794 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XI-2 | Aed10g0864 | Pkinase | 1.4e-42 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aed10g0864 | - | - | gmx:100811980 | 1074.69 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Aed10g0864 | 10 | 7244937 | 7246826 | Aed10g0864 | 10 | 7244937 | 7246826 | ECH |