Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0864 ATGCCTCGGAAAACTCAACCTTTTCTCTGTTTTTCACTCTTTTTTCTCTTCTCAATCTCCATCGACGCGAAACTTGATCTCTACCCTTCAGATTACAAGGCGCTCTTAACTCTGCATAAGGACCTCGGAGTCAACGATCAACTGGATGCAACTGAGGCGTGCGAAACAGAGGGCGTGTTCTGCGAGCGGAGGCTCTCCGGCAAGGAAACCTACGCGCTCCGAATCACAAGACTCGTCTTCAAATCGAAACAACTAAATGGTGTGCTGTCCCCTTCCATAGGACGTCTCACGGAGCTCAAAGAGCTATCTCTCTCCGACAACCACCTCGTTGACCGAGTCCCTCCCCAAATCGTTGACTGCCGAAAGCTCGAAATCCTCGACCTCGCCAACAACCAATTCTCCGGCGAGGTCCCCTCCGAATTATCCTCCCTCACGCGCCTCCGCACGTTGGACATCTCAACCAACAGACTCTCCGGCAACCTCAACTTCCTCAAGTACTTCCCCAATCTTGAAACGCTCTCCGTCGCGGAAAATCTCTTCACCGGAAGAGTCCCTCCCTCCGTCCGCTCCTTCCGCAACCTCCGCCACTTCAACTTCTCCGGCAACCGCTTCCTCGACCCCTCTCTGCAATCATTATCCTCAATCTCATCCTCGAGACGCTTTCTACTAGACGATGGTGATGGTGATGTTCCCGCTCCCGCTCCTGCACCTATTAACGCACACAGGAAAAAATCCAATACTTCTGGTCATGCTGCTGCTGCTGCACCTGGTCCTGCACCTCACCGTATTAAACACAAACACAGTAAGAGAAAACTCTTAGGGTGGATTCTCGGGTTTGTTGCAGGAGCACTAGCTGGAACCTTATCAGGTTTGGTGTTCTCTCTATTATTCAAACTCGCCTTAGCGATGATCAAGGGAAGAGGGAGAAAAGCTGGACCTGACATCTACAGTCCATTGATAAAAAAAGCAGAGGATTTAGCCTTCCTGGAGAAAGAAGACGGAATCGCTTCTTTACAACTCATTGGACGCGGTGGCTGCGGAGAGGTTTACAAGGCGGAGTTGCCAGGAAGCAACGGGAAAATGATTGCTATAAAGAAAATCGTTCAGCCTCCGAAAGACGGAGCAGAGTTAGCAGAGGAAGACAGCAAAGTGCTCCACAAGAAAATGAGGCAAATCCGATCGGAGATAAACACTGTAGGACAAATCAGACACAGAAACCTTCTGCCTCTTCTGGCGCACGTGTCTAGACCTGATTGCCACTACCTTGTCTACGAATTCATGAAGAACGGAAGCTTGCAGGACACTCTCAGCAACGTCGAGAAAGGCGAGGGCGAGTTGGATTGGCTGTCAAGGCACAAGATCGCGCTCGGTGTGGCTGCCGGACTCGAATATCTTCACCTGAGTCACAGCCCTCGAATCATCCATAGGGATCTCAAGCCTGCTAATATTCTCCTCGACGATGACATGGAGGCAAGAATCGCGGATTTCGGACTCGCCAAGGCAATGCCGGACTACCAGACTCACATAACGACCTCAAACGTGGCGGGAACTGTCGGGTACATAGCCCCCGAGTATCACCAGATACTTAAGTTCACTGATAAGTGTGATATCTACAGCTTCGGGGTTATCCTCGGGGTGTTGGTGATTGGGAAGCTTCCTTCTGATGAGTTCTTTCAGCACACCGAAGAGGTGAGTTTGGTCAAGTGGATGCGGAAGGTCTTGAGTTCTGAGAATCCAAAGGAGGCTATTGACAGAAAGCTGCTCGGGAATGGGTTTGAGGAGCAGATGCTTCTGGTTTTGAAGATTGCTTGCTTTTGCACCATGGATGATCCTAAGGAGAGGCCTAACAGTAAGGATGTTAGGTGCATGCTGTCACAGATTAAGCACTGA 1890 0.5042 MPRKTQPFLCFSLFFLFSISIDAKLDLYPSDYKALLTLHKDLGVNDQLDATEACETEGVFCERRLSGKETYALRITRLVFKSKQLNGVLSPSIGRLTELKELSLSDNHLVDRVPPQIVDCRKLEILDLANNQFSGEVPSELSSLTRLRTLDISTNRLSGNLNFLKYFPNLETLSVAENLFTGRVPPSVRSFRNLRHFNFSGNRFLDPSLQSLSSISSSRRFLLDDGDGDVPAPAPAPINAHRKKSNTSGHAAAAAPGPAPHRIKHKHSKRKLLGWILGFVAGALAGTLSGLVFSLLFKLALAMIKGRGRKAGPDIYSPLIKKAEDLAFLEKEDGIASLQLIGRGGCGEVYKAELPGSNGKMIAIKKIVQPPKDGAELAEEDSKVLHKKMRQIRSEINTVGQIRHRNLLPLLAHVSRPDCHYLVYEFMKNGSLQDTLSNVEKGEGELDWLSRHKIALGVAAGLEYLHLSHSPRIIHRDLKPANILLDDDMEARIADFGLAKAMPDYQTHITTSNVAGTVGYIAPEYHQILKFTDKCDIYSFGVILGVLVIGKLPSDEFFQHTEEVSLVKWMRKVLSSENPKEAIDRKLLGNGFEEQMLLVLKIACFCTMDDPKERPNSKDVRCMLSQIKH 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0864 629 SUPERFAMILY L domain-like 73 221 - -
Aed10g0864 629 Gene3D Ribonuclease Inhibitor 30 160 IPR032675 -
Aed10g0864 629 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE KINASE 6 629 - -
Aed10g0864 629 ProSitePatterns Serine/Threonine protein kinases active-site signature. 473 485 IPR008271 GO:0004672|GO:0006468
Aed10g0864 629 SMART serkin_6 335 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed10g0864 629 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 6 629 - -
Aed10g0864 629 Pfam Protein kinase domain 338 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed10g0864 629 MobiDBLite consensus disorder prediction 232 263 - -
Aed10g0864 629 CDD STKc_IRAK 341 627 - -
Aed10g0864 629 Gene3D Transferase(Phosphotransferase) domain 1 427 629 - -
Aed10g0864 629 ProSiteProfiles Protein kinase domain profile. 335 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed10g0864 629 Gene3D Ribonuclease Inhibitor 161 227 IPR032675 -
Aed10g0864 629 Gene3D Phosphorylase Kinase; domain 1 326 426 - -
Aed10g0864 629 SUPERFAMILY Protein kinase-like (PK-like) 331 624 IPR011009 -
Aed10g0864 629 Pfam Leucine rich repeat 98 157 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0864 Aed-Chr10 7244937 7246826 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0864 9 629 Receptor kinase-like Gene Family AT2G31880 63.133 0.0 794
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-2 Aed10g0864 Pkinase 1.4e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0864 - - gmx:100811980 1074.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0864 10 7244937 7246826 Aed10g0864 10 7244937 7246826 ECH