Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0858 ATGGATCCCCCAGCTGTTTCCTCAACCCGCTTACCCGAACCCGACCTTTATTTACAAACTCCCGGTGGAAACCGCATTCCAGCGCACGCAACCATTCTGGCTTCAGCATCCCCAGTTCTAAAAAACGTGATAAGGTCCAAACGAGTCGTCAAAATCCACGGCGTTCCAGACGGCGCCGTGACGGCCTTCGTAGCATTCCTCTACTCCTCCAGATGCAGGGAGAAGGATATGGACAAGTACGGGATGCAGCTTCTGGCACTGTCGCACGCGTATTGGGTGACGCAGCTGAAGCGGATGTGCATCAAGGGACTGAGCGAGCGCGTGAGCACGGAGAACGCGGTGGACGTGTTGCAACTGTCTCGGCTCTGCGACGCACCGGATCTGTACCTCAAGTGCGTGAAGCTCATCGCGAACCACTTCAAAGCCGTGAAAGAGACAGAGGGATGGAAGTTCTTGGAGAACCACGACCCCTGGCTCGAACTCGACATTCTCCGCCTCATCGACGAACACGATAAGAGGAAGAGGAAGGTGAAGAAGTGGAGGGAGGAGGAGAGGCTGTACGCGCAGCTGAGCGAGGCGATGGAGTGTTTGGAGCACATATGCACGGAGGGATGCACGGAGGTGGGGCCGTACGTAGTGGAGGCTCGGCGAGTTCAGAGAGGACCGTGCTCAAAGTTCGCCACGTGTCAGGGTTTGCAGGTATTGATACGACACTTTGCCACTTGCGAGAGGAAGATGAAGGGAGGGTGTTTGCGGTGTAAGCGCATGTGGCAGCTCTTCAGACTCCACTCCTCCATTTGCTGCTCCCGAGATTCATGCAAGGTTCCTCTATGCAGGCAAATTCGGTTGAAAATGGAGCAAGAGAAAGAGAAGAGGAAAGATGACGCAAGGTGGAAACTACTGGTGAGGAAGGTGGCCACGGCCAAAGCCTTGTCTACCTTGGCACTGCGCACCAAAGAGAAAATAAGAGCAGAGGGACCAGGAATAATCCTGCAGCCATCACAAGTTTCATCTTGGCAGAGCTTGCCACTTTGA 1035 0.5469 MDPPAVSSTRLPEPDLYLQTPGGNRIPAHATILASASPVLKNVIRSKRVVKIHGVPDGAVTAFVAFLYSSRCREKDMDKYGMQLLALSHAYWVTQLKRMCIKGLSERVSTENAVDVLQLSRLCDAPDLYLKCVKLIANHFKAVKETEGWKFLENHDPWLELDILRLIDEHDKRKRKVKKWREEERLYAQLSEAMECLEHICTEGCTEVGPYVVEARRVQRGPCSKFATCQGLQVLIRHFATCERKMKGGCLRCKRMWQLFRLHSSICCSRDSCKVPLCRQIRLKMEQEKEKRKDDARWKLLVRKVATAKALSTLALRTKEKIRAEGPGIILQPSQVSSWQSLPL 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0858 344 SUPERFAMILY POZ domain 15 105 IPR011333 -
Aed10g0858 344 Gene3D - 109 180 - -
Aed10g0858 344 Gene3D TAZ domain 181 309 IPR035898 -
Aed10g0858 344 SUPERFAMILY TAZ domain 182 282 IPR035898 -
Aed10g0858 344 Pfam BTB/POZ domain 15 105 IPR000210 GO:0005515
Aed10g0858 344 PANTHER BTB/POZ AND TAZ DOMAIN PROTEIN 10 320 - -
Aed10g0858 344 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 3-RELATED 10 320 IPR044513 -
Aed10g0858 344 CDD BACK 109 153 - -
Aed10g0858 344 ProSiteProfiles BTB domain profile. 14 76 IPR000210 GO:0005515
Aed10g0858 344 Pfam TAZ zinc finger 191 278 IPR000197 -
Aed10g0858 344 Gene3D Potassium Channel Kv1.1; Chain A 13 108 IPR011333 -
Aed10g0858 344 SMART TAZ_2 184 279 IPR000197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0858 Aed-Chr10 7189834 7192423 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Aed10g0858 BTB 2e-07 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0858 - - gmx:100813611 519.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0858 10 7189834 7192423 Aed10g0858 10 7189834 7192423 ECH
Aed6g1380 6 18392436 18395548 Aed10g0858 10 7189834 7192423 PCT