Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aed10g0858 | ATGGATCCCCCAGCTGTTTCCTCAACCCGCTTACCCGAACCCGACCTTTATTTACAAACTCCCGGTGGAAACCGCATTCCAGCGCACGCAACCATTCTGGCTTCAGCATCCCCAGTTCTAAAAAACGTGATAAGGTCCAAACGAGTCGTCAAAATCCACGGCGTTCCAGACGGCGCCGTGACGGCCTTCGTAGCATTCCTCTACTCCTCCAGATGCAGGGAGAAGGATATGGACAAGTACGGGATGCAGCTTCTGGCACTGTCGCACGCGTATTGGGTGACGCAGCTGAAGCGGATGTGCATCAAGGGACTGAGCGAGCGCGTGAGCACGGAGAACGCGGTGGACGTGTTGCAACTGTCTCGGCTCTGCGACGCACCGGATCTGTACCTCAAGTGCGTGAAGCTCATCGCGAACCACTTCAAAGCCGTGAAAGAGACAGAGGGATGGAAGTTCTTGGAGAACCACGACCCCTGGCTCGAACTCGACATTCTCCGCCTCATCGACGAACACGATAAGAGGAAGAGGAAGGTGAAGAAGTGGAGGGAGGAGGAGAGGCTGTACGCGCAGCTGAGCGAGGCGATGGAGTGTTTGGAGCACATATGCACGGAGGGATGCACGGAGGTGGGGCCGTACGTAGTGGAGGCTCGGCGAGTTCAGAGAGGACCGTGCTCAAAGTTCGCCACGTGTCAGGGTTTGCAGGTATTGATACGACACTTTGCCACTTGCGAGAGGAAGATGAAGGGAGGGTGTTTGCGGTGTAAGCGCATGTGGCAGCTCTTCAGACTCCACTCCTCCATTTGCTGCTCCCGAGATTCATGCAAGGTTCCTCTATGCAGGCAAATTCGGTTGAAAATGGAGCAAGAGAAAGAGAAGAGGAAAGATGACGCAAGGTGGAAACTACTGGTGAGGAAGGTGGCCACGGCCAAAGCCTTGTCTACCTTGGCACTGCGCACCAAAGAGAAAATAAGAGCAGAGGGACCAGGAATAATCCTGCAGCCATCACAAGTTTCATCTTGGCAGAGCTTGCCACTTTGA | 1035 | 0.5469 | MDPPAVSSTRLPEPDLYLQTPGGNRIPAHATILASASPVLKNVIRSKRVVKIHGVPDGAVTAFVAFLYSSRCREKDMDKYGMQLLALSHAYWVTQLKRMCIKGLSERVSTENAVDVLQLSRLCDAPDLYLKCVKLIANHFKAVKETEGWKFLENHDPWLELDILRLIDEHDKRKRKVKKWREEERLYAQLSEAMECLEHICTEGCTEVGPYVVEARRVQRGPCSKFATCQGLQVLIRHFATCERKMKGGCLRCKRMWQLFRLHSSICCSRDSCKVPLCRQIRLKMEQEKEKRKDDARWKLLVRKVATAKALSTLALRTKEKIRAEGPGIILQPSQVSSWQSLPL | 344 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aed10g0858 | 344 | SUPERFAMILY | POZ domain | 15 | 105 | IPR011333 | - | |
Aed10g0858 | 344 | Gene3D | - | 109 | 180 | - | - | |
Aed10g0858 | 344 | Gene3D | TAZ domain | 181 | 309 | IPR035898 | - | |
Aed10g0858 | 344 | SUPERFAMILY | TAZ domain | 182 | 282 | IPR035898 | - | |
Aed10g0858 | 344 | Pfam | BTB/POZ domain | 15 | 105 | IPR000210 | GO:0005515 | |
Aed10g0858 | 344 | PANTHER | BTB/POZ AND TAZ DOMAIN PROTEIN | 10 | 320 | - | - | |
Aed10g0858 | 344 | PANTHER | BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 3-RELATED | 10 | 320 | IPR044513 | - | |
Aed10g0858 | 344 | CDD | BACK | 109 | 153 | - | - | |
Aed10g0858 | 344 | ProSiteProfiles | BTB domain profile. | 14 | 76 | IPR000210 | GO:0005515 | |
Aed10g0858 | 344 | Pfam | TAZ zinc finger | 191 | 278 | IPR000197 | - | |
Aed10g0858 | 344 | Gene3D | Potassium Channel Kv1.1; Chain A | 13 | 108 | IPR011333 | - | |
Aed10g0858 | 344 | SMART | TAZ_2 | 184 | 279 | IPR000197 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aed10g0858 | Aed-Chr10 | 7189834 | 7192423 | Dispersed/Wgd |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | TAZ | Aed10g0858 | BTB | 2e-07 | CL0033 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aed10g0858 | - | - | gmx:100813611 | 519.62 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Aed10g0858 | 10 | 7189834 | 7192423 | Aed10g0858 | 10 | 7189834 | 7192423 | ECH | |
Aed6g1380 | 6 | 18392436 | 18395548 | Aed10g0858 | 10 | 7189834 | 7192423 | PCT |