Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aed10g0847 | ATGGGAGTTTCTGAAGGAAACGGCGACGTTTTGCCATGGCTGAAATCGATGCCGGTGGCGCCGGAGTACCGCCCCACCGCGGCGGAGTTTCAAGATCCTATCGGCTACATATTCAAGATCGAGAAAGAAGCTTCCAAGTACGGAATCTGCAAAATCATCCCTCCCTTCCCACCTTCCTCGAGGAAAACCGCCATATCGAACTTCAACCGATCACTCGCGGAAACTGACTCCACATTCACCACGCGCCAGCAGCAGATCGGGTTCTGCCCCCGCAGGCCCAGGCCCGTCCAGAGGCCCGTCTGGGAGAGCGGTGACCGCTACACTTTCAGCGAGTTCGAATCCAAGGCCAAGTCATTCGAGAAAACATACCTCAAACGCCACTCCAAGAAGTCCTCGGGCTCGGGCCCGGGCCCGCTGGAGACTGAAACTCTGTTCTGGAAGGCCACGCTGGACAAACCTTTCTCCGTGGAATACGCGAACGACATGCCGGGCTCGGCGTTTGCCACGAAATTCCGGCGCACAGGGGATCCGAGCTCCCTTGCGGACACACCGTGGAACATGAGAGCGGTTTCGAGGGCCAAAGGTTCGCTCTTGCAGTTCATGAAAGAGGAGATTCCGGGCGTTACTTCTCCAATGGTTTACGTGGCCATGCTCTTCAGCTGGTTCGCGTGGCACGTCGAGGACCATGACTTGCACAGCTTGAATTACCTCCACCTTGGCTCCGGCAAGACCTGGTACGGCGTCCCTCGCGACGCCGCCGTCGCCTTCGAGGAAGTCGTTAGGGTTCACGGCTACGGCGGAGAGATTAACCCGCTCGTTACTTTTGCTATTCTTGGTGAGAAAACCACAGTGATGTCGCCTGAAGTATTTATTAGTGCAGGTGTTCCATGCTGCAGTATAGTTGATGTTTCTAATGCTTTGAATGTATGCTGTGTAGGTTTTAATTGTGGAGAGGCAGCGAACATTGCAACACCTGAGTGGTTGAGGTTTGCTAAAGATGCTGCTATTCGGAGGGCTTCACTAAATTATCCTCCTATGGTTTCACATTTCCAGTTACTTTATGACCTTGCCTTAGCTTTGTGTTCTAGAATTCCTGCTGGCATTAGTGCTGAACCTCGTAGTTCTCGTCTTAAACATAAGAAGAAGGGTGAAGGAGAAACTGTAATTAAAGAACTATTTGTCCAGGATGTGCTACAGAACAATGATCTGCTACATCTTCTTGGGCAAGGATCTGCTGCAGTGCTTCTTCCTCGAAGCTCAGTTGACATTTCTGTTTGCTCAAAATTACGTGTTGGATCCCAGCAATCAATCAATGTAAGCAATTCTGAGGGAATACATTCCTCAAAAGGTTTTGTTTCGGATGATCTGGCATTCAACAGGAATCATGGAATCAAGCAAGTAAAAAGTTTCTATTCTGTGAAAGACAGATTTACTGCATTGTGTGAAAGGAACAGGATTTCCTCTTTTGATGTAAATGGTAACATAAGCATTTCAAGTTCTAAGCCACTTCAAAGAGACACTGAAAGAGAAACTTGTCAAGGAGATGGGTTGTCAGATCAGAGACTGTTTTCATGTGTCACATGTGGAATATTAAGCTTTTCCTGTGTTGCTATTGTACAGCCTAGAGAACCAGCAGCTAGATATCTTATGTCAGCTGATTGCAGTTTCTTTAATGATTGGGTCGTTGGTTCTGGAGTATCTAACAACAAATTTACTGTTGCCCATGAAGAAGCAACTATTCCTGAGCCAAATATGTATACAGGCAGGTATTTTTGGTGCCTCTGTCTTAAGCTCATCAGGAAACATGTCTATTTATTTGGATGGATGAAAAAGAATGTCCAAGATGGTATACATGATGTTCCTGTTCAATCTTCCCAGGAGGCTTTAAATACTGTAACTGAAAATGGCAATACAGCTCTTGCATTATTGGCTTCAGCATATGGAAACTCTTCTGACTCTGAGGAAGATCAGATTACGGCTGAGAGTCATGAATCAAATGTGATGAACTCTGCTTCAGAAAGTTTAATTTCTCATACTCGAAATTCCCATGCTAGTCCCATGAACACACTTGATATGGGAGATTATATTCCTTCAAAGAGTTCCAGTTATGAGGATTTTATACATCATAGATTAGAGTGTAATTTGAGTCACCAGTCTTTAGACCACTCTTTTAAGAAACAGGATTATAATATCACATCAGGGGTTACATTTGAAAATACAAGGACAGTGCCTAACTCCACCTCTAATTGTTCCCAAGATGCTCATGATGCCGAAAGGTCATTGTCTAACAAGTCTATGGTTCCCTTTGATAATAAAAATGCTTCAATGGTGCTACAATCTGATGAAGACTCATCCAGACTGCATGTTTTTTGTCTAGAGCACGCTGCAGAAGCAGAGCAGCAACTTAGGCCAATAGGTGGAGCCCACATATGGCTCCTATGCCATCCAGATTATCCCAAGATAGAGGCTGAAGCAAAAATGGTGGCAGAAGATTTGGGGATGGATTACATGTGGAAGAATATTGAATACAGTGATGCTTCCAAGGAGGATGAGGAGAGGATCCAGTCAGCTCTTGATAGTGAGGAAGCTATTCCTGGGAATAGTGACTGGGCTGTAAAGCTAGGAATCAATCTCTTTTATAGCGCAAGTCTTAGCCGTTCTCCTCTTTATAGTAAGCAGATGCCTTACAATTCTGTTATATACACTGCATTTGGTTGTAGCTCTCCAGCAAGCTCACCCATAGAGCCAAAGGTCTACCAAAGAAGGGTCAACAGGCAGAAAAAGATTGTTGCTGGGAAATGGTGTGGTAAAGTTTGGATGTCCAATCAGGTCCATCCTCTTTTAGCAAAAAGAGATTCTGAAGATATTGAGGATGAGAAACTCCTACTTGGGTTGATATTACCTGATGAGAAAATTGAAAGATCAGAAAGTACCCCCAAAAGTGAAACTACTAGCAGAAAATCAGGTAAGAAAAGGAAAAAGACAGCAGAAAATGGACGAACCAGGAAAGGAAGTTATGCTAAGAGAAATCTACTTTCAGATAATTCCACTGAAGATAAACCCAACTCACAGCCAAGGAGGATTCTTAGAAGTAAGAAAGCCAGGCATGTTGAGAGAGACTGTGCTGCTTTGAAAGGGGATTATTCTCCATATCATCATAGAAAACCTATAAGCAATCAAACAAACTGCACTGAAAGTGATGCAGTTTCTGATGATTCGCTTGATGATGATGATAACATGCAGCATAGGAGGAATGTAAAAGTTGAAAAAGATAAATTTTTTGACAATGATGTGGTTTCAAATGATACAGTGGACTATGATTCTGATTGGCAGCAGAGGGAAGAACTTAGCAGCAAGCAAGTTGAAGATACAGAGAGAGATGCTATTTCAGAGGATTCTTTGGATGTTGGTTCTTTTCCGCTGCAAAGAAAGGCTTCCAAAGGCAAGCCTGCAAAATACATTAGTGAAGAAGATGTAATTTCTGATGACCAAATGGATAGTTGTTTTCAAAAGCAGCAAAGAAGAATTCCTAAAAGCAGGCAAGGCAAATACCTTACTGGAAAAGATATAATATCTGATGACCAACTAGAGCTAAAAATGAAGAAGCAGCACCGGAGGAATCCCAAAAGCAGGCAAGCCAAATACCCCAATGAAGAGGATATTGCATCAGATGACCAATTGGAGGGCCATTATCGGAGATATCAAAGAAGGAATCCTAAAGGCAGACCGGCCAAATGTGAAGCAGGAGAAGATGAAATGTCTGATGACCAATTGGAGGATCATTGTCAGAAGCAGCAAACAAGTTTCTCTAGGAAAAGGCAAAACAAAGGCATTGATAGAGAAGTTAAAAATGAAATGTCTGATGATCAATGGGAGGATCATTTTCTGAAGCTACCGAGAAGATTACCTAAGAGCAAGCAAAACAAACAGACAAATAAAGAAGTCATGGATGACTTAGCTGCGAATAATTCTCAATTGCTGCACAGAACTCCTAAAAGGAAGCAAGCTATATGCATGGACGAAGATGATATGAATTCAGCTGATGAAATGGAAGATGATCAGCAGCTGAGGAGAACTCTTCGAAGTAAACAAGGTACACCAAAGACACTTCAACAGCTGAAACATGCTAATTCCCTCCAAGTGAAAAAGCAGGCATCTCGGCCCATAAAACAGGGGTCTCGGATGGTTGTGAAATCAAAGGCTCCTCAGCAAATAAAACAGACTGCTCATTTGCGGAATAAGCAATCTAATAACACCCAGGAATCTAGTATAGACATGGAAGAGGAGGAGGAAGGTGGACCTAGCACGCGCCTTAGGAAGAGAGCCACAAAAGCTCAGGAATCTGAAGGAAAATTGAAAGCCAAGCAAACAAAAACGAAAAGGAAGAAGGTGAAGAATGCTGCAGCTACAAAGGTTTCAGTTGGCCATTCCAAAATGAAGGATGGGGAAGCAGAATATCAGTGTGATATTGATGGGTGCACTATGAGTTTTGGGTCAAAACAGGAGCTTCTGCATCATAAGAGAAATATCTGTCCTGTAAAAGGGTGTGGGAAGAAGTTTTTCTCACACAAGTATCTGGTGCAGCACCGTCGAGTTCACGAGGATGAGCGCCCCTTGAAGTGCCCTTGGAAGGGATGCAAGATGACTTTCAAGTGGGCATGGGCTCGTACTGAGCACATTCGAGTCCACACTGGTGCACGACCTTACGTATGTGCTGAGCCAGATTGTGGACAAACATTCAGATTTGTGTCTGATTTCAGTCGTCATAAGCGAAAGACTGGTCATTCAGCTAAAAAGAGTTGCCAATAG | 4809 | 0.4375 | MGVSEGNGDVLPWLKSMPVAPEYRPTAAEFQDPIGYIFKIEKEASKYGICKIIPPFPPSSRKTAISNFNRSLAETDSTFTTRQQQIGFCPRRPRPVQRPVWESGDRYTFSEFESKAKSFEKTYLKRHSKKSSGSGPGPLETETLFWKATLDKPFSVEYANDMPGSAFATKFRRTGDPSSLADTPWNMRAVSRAKGSLLQFMKEEIPGVTSPMVYVAMLFSWFAWHVEDHDLHSLNYLHLGSGKTWYGVPRDAAVAFEEVVRVHGYGGEINPLVTFAILGEKTTVMSPEVFISAGVPCCSIVDVSNALNVCCVGFNCGEAANIATPEWLRFAKDAAIRRASLNYPPMVSHFQLLYDLALALCSRIPAGISAEPRSSRLKHKKKGEGETVIKELFVQDVLQNNDLLHLLGQGSAAVLLPRSSVDISVCSKLRVGSQQSINVSNSEGIHSSKGFVSDDLAFNRNHGIKQVKSFYSVKDRFTALCERNRISSFDVNGNISISSSKPLQRDTERETCQGDGLSDQRLFSCVTCGILSFSCVAIVQPREPAARYLMSADCSFFNDWVVGSGVSNNKFTVAHEEATIPEPNMYTGRYFWCLCLKLIRKHVYLFGWMKKNVQDGIHDVPVQSSQEALNTVTENGNTALALLASAYGNSSDSEEDQITAESHESNVMNSASESLISHTRNSHASPMNTLDMGDYIPSKSSSYEDFIHHRLECNLSHQSLDHSFKKQDYNITSGVTFENTRTVPNSTSNCSQDAHDAERSLSNKSMVPFDNKNASMVLQSDEDSSRLHVFCLEHAAEAEQQLRPIGGAHIWLLCHPDYPKIEAEAKMVAEDLGMDYMWKNIEYSDASKEDEERIQSALDSEEAIPGNSDWAVKLGINLFYSASLSRSPLYSKQMPYNSVIYTAFGCSSPASSPIEPKVYQRRVNRQKKIVAGKWCGKVWMSNQVHPLLAKRDSEDIEDEKLLLGLILPDEKIERSESTPKSETTSRKSGKKRKKTAENGRTRKGSYAKRNLLSDNSTEDKPNSQPRRILRSKKARHVERDCAALKGDYSPYHHRKPISNQTNCTESDAVSDDSLDDDDNMQHRRNVKVEKDKFFDNDVVSNDTVDYDSDWQQREELSSKQVEDTERDAISEDSLDVGSFPLQRKASKGKPAKYISEEDVISDDQMDSCFQKQQRRIPKSRQGKYLTGKDIISDDQLELKMKKQHRRNPKSRQAKYPNEEDIASDDQLEGHYRRYQRRNPKGRPAKCEAGEDEMSDDQLEDHCQKQQTSFSRKRQNKGIDREVKNEMSDDQWEDHFLKLPRRLPKSKQNKQTNKEVMDDLAANNSQLLHRTPKRKQAICMDEDDMNSADEMEDDQQLRRTLRSKQGTPKTLQQLKHANSLQVKKQASRPIKQGSRMVVKSKAPQQIKQTAHLRNKQSNNTQESSIDMEEEEEGGPSTRLRKRATKAQESEGKLKAKQTKTKRKKVKNAAATKVSVGHSKMKDGEAEYQCDIDGCTMSFGSKQELLHHKRNICPVKGCGKKFFSHKYLVQHRRVHEDERPLKCPWKGCKMTFKWAWARTEHIRVHTGARPYVCAEPDCGQTFRFVSDFSRHKRKTGHSAKKSCQ | 1602 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aed10g0847 | 1602 | SMART | JmjN_1 | 19 | 60 | IPR003349 | - | |
Aed10g0847 | 1602 | MobiDBLite | consensus disorder prediction | 1054 | 1068 | - | - | |
Aed10g0847 | 1602 | Gene3D | Cupin | 13 | 343 | - | - | |
Aed10g0847 | 1602 | PANTHER | LYSINE-SPECIFIC DEMETHYLASE | 6 | 1592 | - | - | |
Aed10g0847 | 1602 | SUPERFAMILY | beta-beta-alpha zinc fingers | 1482 | 1538 | IPR036236 | - | |
Aed10g0847 | 1602 | MobiDBLite | consensus disorder prediction | 1211 | 1300 | - | - | |
Aed10g0847 | 1602 | MobiDBLite | consensus disorder prediction | 1034 | 1052 | - | - | |
Aed10g0847 | 1602 | MobiDBLite | consensus disorder prediction | 1107 | 1132 | - | - | |
Aed10g0847 | 1602 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 1539 | 1568 | IPR013087 | - | |
Aed10g0847 | 1602 | SMART | cupin_9 | 179 | 339 | IPR003347 | - | |
Aed10g0847 | 1602 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 1571 | 1595 | IPR013087 | - | |
Aed10g0847 | 1602 | ProSiteProfiles | JmjN domain profile. | 20 | 61 | IPR003349 | - | |
Aed10g0847 | 1602 | SMART | c2h2final6 | 1486 | 1508 | IPR013087 | - | |
Aed10g0847 | 1602 | SMART | c2h2final6 | 1539 | 1563 | IPR013087 | - | |
Aed10g0847 | 1602 | SMART | c2h2final6 | 1569 | 1595 | IPR013087 | - | |
Aed10g0847 | 1602 | SMART | c2h2final6 | 1509 | 1533 | IPR013087 | - | |
Aed10g0847 | 1602 | MobiDBLite | consensus disorder prediction | 1360 | 1387 | - | - | |
Aed10g0847 | 1602 | Pfam | JmjC domain, hydroxylase | 212 | 302 | IPR003347 | - | |
Aed10g0847 | 1602 | MobiDBLite | consensus disorder prediction | 973 | 1085 | - | - | |
Aed10g0847 | 1602 | SUPERFAMILY | beta-beta-alpha zinc fingers | 1525 | 1567 | IPR036236 | - | |
Aed10g0847 | 1602 | SUPERFAMILY | Clavaminate synthase-like | 176 | 355 | - | - | |
Aed10g0847 | 1602 | SUPERFAMILY | beta-beta-alpha zinc fingers | 1557 | 1591 | IPR036236 | - | |
Aed10g0847 | 1602 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 1569 | 1600 | IPR013087 | - | |
Aed10g0847 | 1602 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 1511 | 1533 | IPR013087 | - | |
Aed10g0847 | 1602 | ProSiteProfiles | JmjC domain profile. | 172 | 339 | IPR003347 | - | |
Aed10g0847 | 1602 | PANTHER | LYSINE-SPECIFIC DEMETHYLASE REF6 | 6 | 1592 | - | - | |
Aed10g0847 | 1602 | MobiDBLite | consensus disorder prediction | 1430 | 1454 | - | - | |
Aed10g0847 | 1602 | MobiDBLite | consensus disorder prediction | 1105 | 1472 | - | - | |
Aed10g0847 | 1602 | Pfam | jmjN domain | 21 | 54 | IPR003349 | - | |
Aed10g0847 | 1602 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 1541 | 1563 | IPR013087 | - | |
Aed10g0847 | 1602 | MobiDBLite | consensus disorder prediction | 1314 | 1330 | - | - | |
Aed10g0847 | 1602 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 1509 | 1538 | IPR013087 | - | |
Aed10g0847 | 1602 | MobiDBLite | consensus disorder prediction | 1397 | 1422 | - | - | |
Aed10g0847 | 1602 | Gene3D | Classic Zinc Finger | 1537 | 1567 | - | - | |
Aed10g0847 | 1602 | Gene3D | Classic Zinc Finger | 1568 | 1602 | - | - | |
Aed10g0847 | 1602 | Gene3D | Classic Zinc Finger | 1509 | 1536 | - | - | |
Aed10g0847 | 1602 | Gene3D | Classic Zinc Finger | 1454 | 1508 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aed10g0847 | Aed-Chr10 | 7101547 | 7111884 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aed10g0847 | 786 | 887 | C2H2 Transcription Factor Family | AT5G04240 | 33.333 | 2.26e-13 | 73.9 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Aed10g0847 | JmjC | 1.6e-18 | CL0029 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aed10g0847 | - | - | gmx:100775813 | 2713.33 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Aed10g0847 | 10 | 7101547 | 7111884 | Aed10g0847 | 10 | 7101547 | 7111884 | ECH |