Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0843 ATGGACGGCAAGAAACAAGTTTCACCTTCACCTACCTCTTTCTTCAAGCTCATCGCTACGCAAGAATATTTAAAAACTCTGTATATTCCTCCTGCTTTTAGTAGTACTGTGTCAAACTTGGTTAATAAGACAATCGTTCTCAATGATCGAAGTGAGCGGCAATGGAATGTAAAAGTATCAGAAGTTAACGGCTCTTTTGCTTTCAAGGAAGGATGGAGTGTGTTTTCATTGGATCATGGGCTTAAAGTTGGATATCTTCTGGTATTCAATTACGTTAAGGATTTGCACTTTGATGTCAAGATTTACGATCTATCTGCATGTGAAAGGCTTGATTTTCCCAAACCAAGAAAGCAGAAGAAAAGAAGTAGGGGCAGAAATGGCTCGCCAGTTAGACAAGAACAATCTAATGCCTTAGTTCTCTCCAAGCATCATGTGCCAAAAATGAAAAGCCAGCGCTGCAAGGTTGATGACTCAGTAGCACCACAAAATGGTAAAGAGAGTGGCCAACTTATGTGCATATCAGAACACCATGAAGACCCATCAACAAGCATAGGATTTGACCAGAGCCATGGTGCTGATGAAGACCCATTAAGAGTTTCTAATGTTGATTATGGATCCCCCATATTTGAAAATGATGCAATTGTATGTAATAAAGATACTATGTTTGAAGGGATATTCAGTATGGGAGCTGCCTTAGATATATCTGAACTTGAAATGTCTGGAGGAAATCTAGGCGAGGCAGACAAAACCACATATGACAAGACTTCTACTTTGAATATTGAAGAAAACAAAGCCATCATGTTCAAGGGGGAAGCTCAAGAGCTTCTAGTACGTGATCAGGCTGCAATAACCGAAAAGGAACCTGCTTTGCATATTGGTGGTTCTTGCGACACATACCAGACGTTCAATGGGATCTCAAATCCCTTAGATGCTCATATTGAAAATGTTATTATGATCACAGGTGAAATGAAGAAATTGCCTCTGGACATAACTCCCAAATTGTGCTGTTCTATTGATAAATTGAATGTAACAGGTGAAACGCCTGAAAATTTTAAGAAAGAACCTGAGACTCTTGATGAATTGGGAGCAACAGGGTTGCCAAATGAGATTAAGGAAGAGATGGACTCTGGCATGTCTAATCAAGATAATGAGAGTCTCTTTAAAACTGCACCCCCTATCTCCTGTGTGGTGACCGATGATAATGTTTCCCTTAAACTGCCCGAATACCTGCCTTTGACTGTCTGGGTAAAACCAATATTCCAGCATAGGAAGATGGTAGTGTTCCTTCGGGATCCACTGAGAAGATTGTGGCCTGTATTATACCACGAACAACCACGGTTACTGACACATGGATGGTTAGATTTTAGCAGAGCTAATAACATTGAACCAGGAGATGAGTGTGTTTTTGAGGTTGAGCATGACCCTGAGAGCAGGTATCAACGTATATTAGCTATCCTAGACTCCTGTACCACAATGGCTTCACGTCAATGA 1491 0.4064 MDGKKQVSPSPTSFFKLIATQEYLKTLYIPPAFSSTVSNLVNKTIVLNDRSERQWNVKVSEVNGSFAFKEGWSVFSLDHGLKVGYLLVFNYVKDLHFDVKIYDLSACERLDFPKPRKQKKRSRGRNGSPVRQEQSNALVLSKHHVPKMKSQRCKVDDSVAPQNGKESGQLMCISEHHEDPSTSIGFDQSHGADEDPLRVSNVDYGSPIFENDAIVCNKDTMFEGIFSMGAALDISELEMSGGNLGEADKTTYDKTSTLNIEENKAIMFKGEAQELLVRDQAAITEKEPALHIGGSCDTYQTFNGISNPLDAHIENVIMITGEMKKLPLDITPKLCCSIDKLNVTGETPENFKKEPETLDELGATGLPNEIKEEMDSGMSNQDNESLFKTAPPISCVVTDDNVSLKLPEYLPLTVWVKPIFQHRKMVVFLRDPLRRLWPVLYHEQPRLLTHGWLDFSRANNIEPGDECVFEVEHDPESRYQRILAILDSCTTMASRQ 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0843 496 Gene3D - 7 107 IPR015300 -
Aed10g0843 496 CDD B3_DNA 418 470 IPR003340 GO:0003677
Aed10g0843 496 ProSiteProfiles B3 DNA-binding domain profile. 427 489 IPR003340 GO:0003677
Aed10g0843 496 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 3 476 IPR044837 -
Aed10g0843 496 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS01G0905400-LIKE ISOFORM X1 3 476 - -
Aed10g0843 496 SUPERFAMILY DNA-binding pseudobarrel domain 10 107 IPR015300 -
Aed10g0843 496 SMART B3_2 14 105 IPR003340 GO:0003677
Aed10g0843 496 Gene3D - 373 481 IPR015300 -
Aed10g0843 496 SUPERFAMILY DNA-binding pseudobarrel domain 399 474 IPR015300 -
Aed10g0843 496 Pfam B3 DNA binding domain 14 102 IPR003340 GO:0003677
Aed10g0843 496 MobiDBLite consensus disorder prediction 115 137 - -
Aed10g0843 496 ProSiteProfiles B3 DNA-binding domain profile. 12 105 IPR003340 GO:0003677
Aed10g0843 496 CDD B3_DNA 13 103 IPR003340 GO:0003677
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0843 14 108 B3 DNA Binding Superfamily AT4G01580 31.250 6.37e-10 57.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Aed10g0843 B3 5.6e-13 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0843 - - ccaj:109789322 525.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0843 10 7015927 7019598 Aed10g0843 10 7015927 7019598 ECH