Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0839 ATGATGAGCTTATCAAATTTTCCACTTTTTAAATTTATCAGGAGGCCAGATTATTGTCTTGGGCCTCACTTGCGTCAAATGCTTTCTTATGGTTGTACACGATTGGAAATTGGAGTCCAAAGCACCTATGAGGATGTTGCTCAGGACACAAACAGAGGACACACTGTAGCTGCTGTAGCCGATTGTTTTTGCTTGGCTAAAGATGCTGGTTTCAAGGATATTCACCACCAAATTAAGCCAGAAGAGGTGGAGCTTGTCCGGCGTGATTATATGGCAAATGAGGGTTGGGAAACCTTTCTATCATATGAAGATACACGGCAGGATATCCTTGTTGGTTTGTTGCGACTGCGGAAATGTGGCCGCAGCACTACTTGTCCAGAGCTTATGGGAAAGTGTTCTATTGTTCGTGAACTCCATGTTTATGGAACTGCTGTACCAGTTCATGGACGGGATGCTGCCAAGCTACAACACCAGGGTTATGGCACACTTTTGATGGAGGAGGCAGAGCACATTGCTTGCAGAGAACACAGATCAACAAAAATAGCTGTAATTTCAGGGGTTGGCACACGCAATTATTACAGGAAACTGGGATATGAGCTTGATGGACCTTACATGGTGAAATATCTATTGAAATAA 636 0.4355 MMSLSNFPLFKFIRRPDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVAQDTNRGHTVAAVADCFCLAKDAGFKDIHHQIKPEEVELVRRDYMANEGWETFLSYEDTRQDILVGLLRLRKCGRSTTCPELMGKCSIVRELHVYGTAVPVHGRDAAKLQHQGYGTLLMEEAEHIACREHRSTKIAVISGVGTRNYYRKLGYELDGPYMVKYLLK 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0839 211 PANTHER ELONGATOR COMPLEX PROTEIN 3 14 72 IPR034687 -
Aed10g0839 211 Pfam Acetyltransferase (GNAT) family 76 198 IPR000182 GO:0016407
Aed10g0839 211 PANTHER HISTONE ACETYLTRANSFERASE-RELATED 69 209 IPR039661 -
Aed10g0839 211 PANTHER HISTONE ACETYLTRANSFERASE-RELATED 14 72 IPR039661 -
Aed10g0839 211 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 71 209 IPR016181 -
Aed10g0839 211 PANTHER ELONGATOR COMPLEX PROTEIN 3 69 209 IPR034687 -
Aed10g0839 211 Gene3D - 64 210 - -
Aed10g0839 211 Pfam Radical SAM superfamily 22 76 IPR007197 GO:0003824|GO:0051536
Aed10g0839 211 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 57 211 IPR000182 GO:0016407
Aed10g0839 211 SUPERFAMILY Radical SAM enzymes 15 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0839 Aed-Chr10 6992582 6997155 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Aed10g0839 Acetyltransf_1 3e-09 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0839 K07739 - gmx:100818764 284.648