Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0820 ATGGCTACTACCCAAACCCAAACACAGTCACATCCAAACGCCGTCATCGACCCAAACAGTGGTTTCTGTTCTCATTCCAGAACCTTCCACAGCCTCCGTCCAAACGTCCCTCTCCCTCCACCGTCGTACCCACTCTCCCTCACCGACTACGTACTCTCCGTCCTCCCCGCCGCATCCGCCGCCGCCGCCGGCGGAACCTCCGCCATTATCGACGCCGCCACCGACCGCCATCTCTCATACTCCGTCCTCCTCCGGCAGGTGAAATCCCTGACCTCCTCCCTCCAATCCCTCACGTCTCTCTCGAAAGGCCACGTAGCACTAATCCTCACCCCAACCTCCGTGCACGTCCCCGTACTCTATTTCGCCCTCCTCTCCCTCGGCGTCACAATCGCGCCCGCGAACCCGCTCAGTTCGCAATCCGAGTTGACTCACAACGTTCAACTCACCAAACCCGCCATCGCCTTCGCCACCTCGAACGCCGCGAAGAACATTCCCTCACTCAAATTCGGCACAATCCTGCTCGATTCCCCACTCTTCCTTTCCATGCTCAACAACAACAGCGACAACAACGCCAACGCAGATTCACGCGCTAACCGAGTCGAAGTGAGTCAGTCCGACTCAGCGGCGATTCTCTTCTCCTCCGGCACCACGGGGCGGGTGAAGGGCGTGCTCCTCACGCACCGCAACTTCATCGCGCTGATCGGAGGGTTTTGCCACCTCAGGAACGTGGTGGACGGTGACCCGCACCCGGTGTCTCTGTTCACGCTGCCGCTGTTCCACGTGTTCGGGTTCTTCATGCTGGTTAGAGCCATCGCCGTAGGGGAGACGCTGGTGTTCATGCAGAGGTTCGAATTCGAAGGGATGCTCAAGGCCGTGGAGAGGTACAGAATCACCTACATGCCGGTGTCGCCGCCGCTAGTGGTGGCGCTGGGGAAGTCGGAGCTGGTGAAGAAGTACGATCTCAGCTCGCTCCGGTATCTAGCTAGCGGCGGCGCACCGCTCGGCAGGGAAGTCGCCGCCGACTTCCAAGGCAAATTCCCCAACGTGGAAATTGGGCAGGGCTATGGTTTGACTGAAAGTGGAGGAGGGGCAGCTAGAGTGTTGGGGCCTGATGAGACAAAGCGCCATGGTTCTGTGGGTCGACTATCAGAAAATATGGAGGCCAAGATAGTGGACCCTGTAACTGGCGAAGCATTATCTCCTGGCCAAAAAGGGGAGCTTTGGTTGCGAGGTCCAACAATCATGAAAGGTTATGTAGGAGATGATAAGGCGACAGCTGAAACATTGGATTCAGAAGGGTGGCTCAAGACTGGCGATCTTTGTTATTTTGACTCTGATGGTTTCCTCTACATTGTAGATAGATTGAAGGAATTGATTAAATACAAAGCTTATCAGGTTCCCCCTGCTGAATTGGAACATTTACTTCACACCAATTCTGAAATTGCTGATGCTGCAGTAGTTCCGTATCCTGATGAAGAGGCAGGACAGATTCCAATGGCCTTTGTAGTAAGAAAACCTGGAAGCAACATCACTGCAGATCAGATCATGGCGTTTGTGGCAAAGCAGGTTTCACCATACAAGAAGATACGGCGAGTTTCTTTTATAAAATCTATTCCAAAATCTCCGGCTGGCAAAATTTTGAGAAGAGAATTAGTTGATATTGCTCTATCCAGTGGTTCATCCAAATTGTGA 1692 0.539 MATTQTQTQSHPNAVIDPNSGFCSHSRTFHSLRPNVPLPPPSYPLSLTDYVLSVLPAASAAAAGGTSAIIDAATDRHLSYSVLLRQVKSLTSSLQSLTSLSKGHVALILTPTSVHVPVLYFALLSLGVTIAPANPLSSQSELTHNVQLTKPAIAFATSNAAKNIPSLKFGTILLDSPLFLSMLNNNSDNNANADSRANRVEVSQSDSAAILFSSGTTGRVKGVLLTHRNFIALIGGFCHLRNVVDGDPHPVSLFTLPLFHVFGFFMLVRAIAVGETLVFMQRFEFEGMLKAVERYRITYMPVSPPLVVALGKSELVKKYDLSSLRYLASGGAPLGREVAADFQGKFPNVEIGQGYGLTESGGGAARVLGPDETKRHGSVGRLSENMEAKIVDPVTGEALSPGQKGELWLRGPTIMKGYVGDDKATAETLDSEGWLKTGDLCYFDSDGFLYIVDRLKELIKYKAYQVPPAELEHLLHTNSEIADAAVVPYPDEEAGQIPMAFVVRKPGSNITADQIMAFVAKQVSPYKKIRRVSFIKSIPKSPAGKILRRELVDIALSSGSSKL 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0820 563 SUPERFAMILY Acetyl-CoA synthetase-like 52 556 - -
Aed10g0820 563 CDD 4CL 69 551 - -
Aed10g0820 563 Gene3D - 42 456 IPR042099 -
Aed10g0820 563 ProSitePatterns Putative AMP-binding domain signature. 210 221 IPR020845 -
Aed10g0820 563 PANTHER 4-COUMARATE--COA LIGASE-LIKE 9 29 552 - -
Aed10g0820 563 Gene3D - 457 557 IPR045851 -
Aed10g0820 563 Pfam AMP-binding enzyme C-terminal domain 470 545 IPR025110 -
Aed10g0820 563 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 29 552 - -
Aed10g0820 563 Pfam AMP-binding enzyme 60 461 IPR000873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0820 Aed-Chr10 6841308 6846376 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0820 8 563 Monolignol Biosynthesis Gene Families AT5G63380 59.469 0.0 677
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0820 K01904 - gmx:100777435 953.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0820 10 6841308 6846376 Aed10g0820 10 6841308 6846376 ECH