Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0819 ATGGGGTTTCATGACTTGGTTTTGCTATTCTGTTCAGCTTGGTGTGTCTTTTATGTGGCAAATTGCAGTGCTCAGTTGCAATCCTCTCAGACCCAGGTGCTTCTCCAGTTGAAAAAGCACTTGGAGTACCCAAAACAATTGGAAATATGGAGAGATCGTTGGTCAGATCTTTGCTCTATATCCTCTTCTGGGCAAGTTAATGTCACATGCAAGGACAATTTCGTCACTGAGCTAACCATCTTGGGTGATAAGCCAACAAAGGGTAGAGATTTTGATGGGTTTTCCAATCCAAATCAAACAACACTATCAGATAGCTTCTCAATGGACTCTTTTGTGGCTACTCTGGCAAGGCTAACCAGCCTCAGAGTCCTTACTCTTGTCTCTTTGGGCATGTGGGGACCACTCCCTGATAGAATTCACAGACTTTATTCACTTGAACATTTGGACTTGAGTTCCAATTATCTCTATGGATCAATCCCTCCAAAGATTTCCACAATGGTGAACCTTCAAACTCTTAGATTGGGTGATAACTTCTTCAATGGTACCATCCCAAGCTTGTTCAATTCATCAAGCAACCTCACAGTTCTTAGTTTGAGGAATAACAGGTTGAAGGGTCCATTTCCACCTTCAATCCTTAGTGTCACCACCCTAACTCAAATTGACATGTCAAGCAATCAAATTTCAGGGAGCTTGCAAGATTTTACTGATTTGAGTGGCTTGGAACAACTAGATTTAAGGGAAAACATGTTAGATTCTAACCTACCTGCAATGCCAAAAGGGTTGATAAGTCTTTTCCTCAGCAGAAACTCCTTCTCAGGTGAAATTCCCAAGCACTATGGTCAATTAAGTAGGCTTGAGAAGCTTGATGTTTCCTTCAATGCACTCACAGGCACTGCTCCTGCTGAAATTTTCTCTTTGCCAAACATCAGTTACTTGAATTTGGCATCCAACATGTTGAATGGACCACTCCAGAGCCACCTAAGATGTAGCAGCCAACTTAGATTTGTTGACATATCATACAATAGATTTGTTGGGGACTTGCCTTCTTCACTGAGCACTAAATCAGAAAATAGAGTTGTTAAGAGTGATGGAAACTGTTTATCTGGGAGTGTGCATCATCAGCATGCAGTGTCCTACTGCACAGAAGCTCATGTGAAGAAGAAATCATACAGAGTTGGAGTTTTTGTTGGTTTCATTGTGGGAATTCTTGTAATCGCTGTGGTTTTGGCTTTGACCATTGTTTTAACTTGCAAAAGGTGGTATGTTTCTGAAGCTGCAAAGTTAGGCAGAGAGGACCTCCCCACATGTCGTTCATATTCCTTGGAAGAGATAAAGGAAGCCACAAATAACTTTGACAACTCAACTTTTATGGGTGAAAATATATATGGGAAGCTTTACAAAGGAAAATTGGAGAGTGGAATACAGGTTGTAATAAGGTCCTTGCCTTTGTCAAAAAAGTATTCAATTAGGAATTTCAAGCTGAGGTTGGATTTGCTTGCAAAGCTGCGTCACCCTTATTTGGTATCCCTCTTGGGGCACTGCATGGATGGTGTTGTTGGAGAGAGTAATGAGGCAAATGTCTTTCTCATTTATGAATATGTGTCAAATGGGACTTTTCAGACTTATCTCTCTGGAGATAGTCCTGGCAAGGTTTTCAATTGGTCGGAGCGATTGTCAGTACTAATTAACATTGCTAAGGCTGTCCATTTCCTACACACCGGCATGATACCTGGTTTCTTCAAAAATCGACTTAAGACCAACAATGTCTTGCTGAATGAACATTGGATGGCGAAGTTGAGTGACTATGGATTATCCATTATATCAGAAGAAACTGATGCTTGTGGTGTAAAAGGAGAAAATCCTGATTCATGGCAAATGAAAATGTTAGAGGATGATGTTTATAGCTTTGGATTCATACTACTCGAGGCACTTGTTGGACCTTCAGCATCAGCTAAAAGAGAAGCAAATGTGCTGAGTGTAATGATTGTGGATCCAGTTGTGCAAGCTACATGCTCCAAAGAATCTCTATTAGTTGTGATTTCCATAACAAACAAATGTATATCTTCTGAGTCATGGAGCCGACCACCTATTGAGGATGTTCTTTGGAACCTTCAGTATGCTTCTCAAATTCAAGCAACAGCTGCTGATGGGGATCAGAGAATTTGA 2166 0.4081 MGFHDLVLLFCSAWCVFYVANCSAQLQSSQTQVLLQLKKHLEYPKQLEIWRDRWSDLCSISSSGQVNVTCKDNFVTELTILGDKPTKGRDFDGFSNPNQTTLSDSFSMDSFVATLARLTSLRVLTLVSLGMWGPLPDRIHRLYSLEHLDLSSNYLYGSIPPKISTMVNLQTLRLGDNFFNGTIPSLFNSSSNLTVLSLRNNRLKGPFPPSILSVTTLTQIDMSSNQISGSLQDFTDLSGLEQLDLRENMLDSNLPAMPKGLISLFLSRNSFSGEIPKHYGQLSRLEKLDVSFNALTGTAPAEIFSLPNISYLNLASNMLNGPLQSHLRCSSQLRFVDISYNRFVGDLPSSLSTKSENRVVKSDGNCLSGSVHHQHAVSYCTEAHVKKKSYRVGVFVGFIVGILVIAVVLALTIVLTCKRWYVSEAAKLGREDLPTCRSYSLEEIKEATNNFDNSTFMGENIYGKLYKGKLESGIQVVIRSLPLSKKYSIRNFKLRLDLLAKLRHPYLVSLLGHCMDGVVGESNEANVFLIYEYVSNGTFQTYLSGDSPGKVFNWSERLSVLINIAKAVHFLHTGMIPGFFKNRLKTNNVLLNEHWMAKLSDYGLSIISEETDACGVKGENPDSWQMKMLEDDVYSFGFILLEALVGPSASAKREANVLSVMIVDPVVQATCSKESLLVVISITNKCISSESWSRPPIEDVLWNLQYASQIQATAADGDQRI 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0819 721 Pfam Leucine rich repeat 168 227 IPR001611 GO:0005515
Aed10g0819 721 Pfam Leucine rich repeat 283 343 IPR001611 GO:0005515
Aed10g0819 721 PANTHER BNAA09G06560D PROTEIN 4 415 - -
Aed10g0819 721 Gene3D Phosphorylase Kinase; domain 1 419 533 - -
Aed10g0819 721 Gene3D Transferase(Phosphotransferase) domain 1 534 719 - -
Aed10g0819 721 Gene3D Ribonuclease Inhibitor 261 395 IPR032675 -
Aed10g0819 721 Pfam Protein tyrosine and serine/threonine kinase 457 701 IPR001245 GO:0004672|GO:0006468
Aed10g0819 721 SUPERFAMILY L domain-like 115 372 - -
Aed10g0819 721 Gene3D Ribonuclease Inhibitor 27 260 IPR032675 -
Aed10g0819 721 SUPERFAMILY Protein kinase-like (PK-like) 434 705 IPR011009 -
Aed10g0819 721 SMART LRR_typ_2 142 166 IPR003591 -
Aed10g0819 721 SMART LRR_typ_2 237 260 IPR003591 -
Aed10g0819 721 SMART LRR_typ_2 282 306 IPR003591 -
Aed10g0819 721 PANTHER BNAA09G06560D PROTEIN 418 720 - -
Aed10g0819 721 ProSiteProfiles Protein kinase domain profile. 451 707 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed10g0819 721 PANTHER OS07G0166700 PROTEIN 418 720 IPR045272 GO:0004714|GO:0006468
Aed10g0819 721 PANTHER OS07G0166700 PROTEIN 4 415 IPR045272 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0819 Aed-Chr10 6804456 6808835 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0819 6 709 Miscellaneous Gene Families AT5G14210 46.729 0.0 635
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Aed10g0819 PK_Tyr_Ser-Thr 7.5e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0819 - - gmx:100802978 1219.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0819 10 6804456 6808835 Aed10g0819 10 6804456 6808835 ECH