Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0815 ATGGTTTCAACGAGACGCAACAGTGGATCTTTCTCCAATAGCAGTAACAACAAGAGGTCTTCTTCTTCTTCCGAAGACAAGACTCCCTCTCCTTCCTCCAAGCGCCCAAAGGTCGACAATGGTGCCGCCGCGTCGGAGAAATCGATGCCGCCGGCGGAAGCTTCCAAGGAATTGGGCACGTCGGAGCCGCCAGCTGATCCCGGAGAATGCGGCACTCAGGACGCGCAGATCGCCGCCGCTGCCAGTTCTGACGGCAAGGTCGAGGCTACTCAGCCGATCGCCGATGGTTCTACACCGACTATGGTGGCTGATAAACCTAGGGGTTCTTTCTCTTCTTGGAGGCAAAACCCAAATTCCGAAGCTTCAGTTCCATGGTGCAGACTCTTGTCTCAGTCTGGGCAGAATCCAAATGTTTCAATTTGCCCACCCAACTTTGTCATTGGCTCAAGTAGGAGCTGCAATTTTTTGTTGAAGGATCAGACTATCAGTGGAAATTTGTGCAAGATTAAGCATACGCAGCGCGAGGGATGTGTCGGGGAAAGTGTCGTGGCTGTGCTAGAAAGTACGGGTAGCAAAGGATCAGTTATAGTGAATGGGACGCTAGTCAAGAAGAGCACCTGCTGCGTGCTTAGCTCGGGGGATGAGGTGGCTTTTGGTTCGCTGGGGAATCATTCTTATATTTTTCAGCAAATAAGTCCCGACATTGCAGTTAAGGCTGCAGAAATTCAGGGTGGCATTGGCAGGTTTTTTCAGACTGAGAGGAGGGCTGGAGATCCTTCAGCCGTGGCTGGAGCTTCTATTTTGGCCTCTCTTTCTAACCTCAGACAGGATATTGCAAGATGGAGATCTCCATCTCAAGCTACCAGTAAACCTCAGCAGGGTACTGATGTTTCTAGTCATCCTGTTATCCCTGATGGTACAGAAACTGAGCTCGCTGGCCTGAAAGGCAACTCAGCTCCAAATGCAACTGATAAAGCTTCTGATGTTGGAACAAGCAACAAGAATTCGCCCATGGATTATGATCCAGATGATGCAGGCGCAGAGGCAGGCAATGTAAAAATCTCTGGGGTGAATGCTTTCCTAGGGCCTTTCTTCAGGATTCTAGCTGGTTCTACTTGTAAACTGAAATTGAGCAAAAGTATCTGTAAACAGGTATTTGAAGAAAGAAATGGGACGAGGGATGCGCAAGCTGCATCGACTTCGGGTACTTCTGTACGCTGTGCAATTTTTAAAGACGATGTCCATGCTGCAATACTGGATGGGAAAGAAATAGAAGTGTCCTTTGACAACTTCCCGTACTACTTAAGTGAAAATACAAAAAGTGTCCTAATTGCAGCTTGCTTTATACACATGAAGCATAAAGAACATGCGAAGTACACCACAGATCTTACAACCATAAACCCTCGTATATTACTCTCAGGACCTGCAGGGTCAGAAATATATCAGGAGATGTTGGCAAAAGCACTTGCAAAATACTTTGGAGCTAAATTGCTCATATTTGATAGCCATTCGCTTTTGGGTGGTTTATCTTCCAAGGAAGCTGAGCTTCTCAAAGATGGATTAAATGCTGAGAAGTCCTGCGCCCATGCTAAACAAAGTCCTACAGCCACAGACATGGCTAGGAGCATGGATCCATCAGCTAATGAACCAGATACACTTAACTCCTCAAATGCACGTACTTCATATGGCTTTGAGTCTCAACCTAAGTTGGAAGCTGATAGTGTACCATCTACCTCTGGGACAGCTAAAAATGGTGTGTTTAAACTAGGTGACAGGGTAAAATATAGTTCATCTTCTGGGGGCTTTTATCAGCTTCAGACAATTTCTTCAAGGTTCAAGGGTCCAGCTAATGGAAGTCGGGGGAAGGTTGTCTTAGTTTTTGATAATCCCTTGTCAAAAATTGGTGTAAGATTTGATAAACCCATACCTGATGGAGTTGATCTTGGAGGTTACTGTGAGGGTGGTCAAGGATTTTTCTGCAATGTCACTGACCTTCGATTGGAAAACAGTGGCATTGAAGAACTTGACAAATTACTTATTAATACATTATTTGAGGTTGTAGTTAGTGAGAGTAGAAATGCACCTTTTATTTTGTTCATGAAAGATGCAGAGAAGTCTATAGTAGGGAATGGAGATCCATTTTCATTTAAAAGTAAGCTTGAAAATCTTCCAGACAATGTGGTGGTAATAGGTTCACACACCCACACTGACAGTCGAAAGGAAAAGTCACATCCTGGGGGTTTGCTTTTTACAAAGTTCGGAAGTAATCAGACTGCTCTTCTTGATTTGGCTTTCCCCGATGAGGCACTTCTATCATCTTGGAAGCAGCAACTTGATCGAGATGTTGAGACTCTTAAAATTAAAGGAAATTTGCACAATTTACACACAGTTTTGAGCCGTTGTGGGATGGAATGTGAAGGACTTGAGACCTTGTGCATTAAGGATCAGACACTTAGTATTGAAAATGTAGAGAAGATAGTTGGTTGGGCTTTTAGCCACCATCTCATGCAGAATGCTGAAACTGACCCTGATGCAAAGCTTGTGTTGTCTTGTGAGAGGTAA 2562 0.4469 MVSTRRNSGSFSNSSNNKRSSSSSEDKTPSPSSKRPKVDNGAAASEKSMPPAEASKELGTSEPPADPGECGTQDAQIAAAASSDGKVEATQPIADGSTPTMVADKPRGSFSSWRQNPNSEASVPWCRLLSQSGQNPNVSICPPNFVIGSSRSCNFLLKDQTISGNLCKIKHTQREGCVGESVVAVLESTGSKGSVIVNGTLVKKSTCCVLSSGDEVAFGSLGNHSYIFQQISPDIAVKAAEIQGGIGRFFQTERRAGDPSAVAGASILASLSNLRQDIARWRSPSQATSKPQQGTDVSSHPVIPDGTETELAGLKGNSAPNATDKASDVGTSNKNSPMDYDPDDAGAEAGNVKISGVNAFLGPFFRILAGSTCKLKLSKSICKQVFEERNGTRDAQAASTSGTSVRCAIFKDDVHAAILDGKEIEVSFDNFPYYLSENTKSVLIAACFIHMKHKEHAKYTTDLTTINPRILLSGPAGSEIYQEMLAKALAKYFGAKLLIFDSHSLLGGLSSKEAELLKDGLNAEKSCAHAKQSPTATDMARSMDPSANEPDTLNSSNARTSYGFESQPKLEADSVPSTSGTAKNGVFKLGDRVKYSSSSGGFYQLQTISSRFKGPANGSRGKVVLVFDNPLSKIGVRFDKPIPDGVDLGGYCEGGQGFFCNVTDLRLENSGIEELDKLLINTLFEVVVSESRNAPFILFMKDAEKSIVGNGDPFSFKSKLENLPDNVVVIGSHTHTDSRKEKSHPGGLLFTKFGSNQTALLDLAFPDEALLSSWKQQLDRDVETLKIKGNLHNLHTVLSRCGMECEGLETLCIKDQTLSIENVEKIVGWAFSHHLMQNAETDPDAKLVLSCER 853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0815 853 CDD FHA 125 229 IPR000253 GO:0005515
Aed10g0815 853 MobiDBLite consensus disorder prediction 314 338 - -
Aed10g0815 853 Pfam FHA domain 146 219 IPR000253 GO:0005515
Aed10g0815 853 MobiDBLite consensus disorder prediction 527 581 - -
Aed10g0815 853 SUPERFAMILY SMAD/FHA domain 115 225 IPR008984 GO:0005515
Aed10g0815 853 PANTHER ATPASE FAMILY AAA DOMAIN-CONTAINING PROTEIN 1-A ISOFORM 1 749 852 - -
Aed10g0815 853 PANTHER ATPASE FAMILY AAA DOMAIN-CONTAINING PROTEIN 1-A ISOFORM 1 72 358 - -
Aed10g0815 853 PANTHER ATPASE FAMILY AAA DOMAIN-CONTAINING PROTEIN 1-A ISOFORM 1 384 748 - -
Aed10g0815 853 MobiDBLite consensus disorder prediction 282 344 - -
Aed10g0815 853 MobiDBLite consensus disorder prediction 282 302 - -
Aed10g0815 853 Gene3D - 124 235 - -
Aed10g0815 853 MobiDBLite consensus disorder prediction 1 117 - -
Aed10g0815 853 MobiDBLite consensus disorder prediction 528 564 - -
Aed10g0815 853 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 749 852 - -
Aed10g0815 853 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 72 358 - -
Aed10g0815 853 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 384 748 - -
Aed10g0815 853 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0815 Aed-Chr10 6761932 6772252 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0815 - - gmx:100780098 1403.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0815 10 6761932 6772252 Aed10g0815 10 6761932 6772252 ECH
Aed6g1346 6 18148581 18161074 Aed10g0815 10 6761932 6772252 PCT