Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0813 ATGAACACGGGCTTTGTCGAGAGGGGATCCAATTTGATTTCATCTGCTCCATCAGACGAGTATGTGAATGTTTCCAGGTGGTACAAGCACATTGATGCTTTGTTGAGAATCTCTGGTGTTTCTGGCGAGGGATCTGGTGTTACTGTTGAGGGATCTCTTGTTGCGGAGCCTGTTGCAACTCCCCCAGCTGCTGACACAAAGGCAAGTGTTCTACTAATGATACCTGCGGCTGCTGCTGAGGATGACGACGATGATGATGTGGATTTGTTTGGTGAAGAGACAGAAGAAGAGAAGAAGGCGGCTGAGGATCGGGCAGCTGCAGTGAAGGCATCTACAAAAAGAAAGAGTGTAAGTTTCTTTTCTCTTGCCACTATAGTATTTAAAGTTTCTCCGCCTCATCCCCTGACTATACTACTTTTTGAGGTGATTGACTTTCTCCTGATTCTGGTTTCAGCTGGGAAATCATCTGTTCTGTTGGATGTGAAACCATGGGATGATGAAACTGACATGAAAAAGCTTGAAGAAGCAGTGAGATCTGTTGAGATGGAAGGATTGCTTTGGGCCAAACTTGTTCCTGTTGGGTACGGTATCAAGAAGCTTTGTATTATGCTTACCATTGTGGATGACCAAGTTTCTGTTGATTCTCTTATTGAGGACCGTCTCACAGTTGAGCCCATCAGTGAATATGTCCAGAGTTGTGACATTGCGGCCTTCAATAAAATATGTCTATAA 732 0.444 MNTGFVERGSNLISSAPSDEYVNVSRWYKHIDALLRISGVSGEGSGVTVEGSLVAEPVATPPAADTKASVLLMIPAAAAEDDDDDDVDLFGEETEEEKKAAEDRAAAVKASTKRKSVSFFSLATIVFKVSPPHPLTILLFEVIDFLLILVSAGKSSVLLDVKPWDDETDMKKLEEAVRSVEMEGLLWAKLVPVGYGIKKLCIMLTIVDDQVSVDSLIEDRLTVEPISEYVQSCDIAAFNKICL 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0813 243 Coils Coil 91 111 - -
Aed10g0813 243 SMART EF1_GNE_2 154 241 IPR014038 GO:0003746|GO:0006414
Aed10g0813 243 Pfam EF-1 guanine nucleotide exchange domain 156 241 IPR014038 GO:0003746|GO:0006414
Aed10g0813 243 ProSitePatterns Elongation factor 1 beta/beta'/delta chain signature 1. 83 91 IPR001326 GO:0003746|GO:0005853|GO:0006414
Aed10g0813 243 PANTHER EF-HAND AND COILED-COIL DOMAIN-CONTAINING FAMILY MEMBER 13 118 - -
Aed10g0813 243 SUPERFAMILY eEF-1beta-like 153 241 IPR036219 -
Aed10g0813 243 ProSitePatterns Elongation factor 1 beta/beta'/delta chain signature 2. 230 241 IPR001326 GO:0003746|GO:0005853|GO:0006414
Aed10g0813 243 PANTHER RIPENING REGULATED PROTEIN DDTFR10-LIKE 13 118 - -
Aed10g0813 243 PANTHER RIPENING REGULATED PROTEIN DDTFR10-LIKE 152 242 - -
Aed10g0813 243 Gene3D - 150 241 IPR014717 -
Aed10g0813 243 PANTHER EF-HAND AND COILED-COIL DOMAIN-CONTAINING FAMILY MEMBER 152 242 - -
Aed10g0813 243 CDD EF1B 152 241 IPR014038 GO:0003746|GO:0006414
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0813 Aed-Chr10 6738653 6740336 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0813 13 241 Eukaryotic Initiation Factors Gene Family AT2G18110 62.661 1.97e-73 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0813 K03232 - gmx:100777627 261.151
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0813 10 6738653 6740336 Aed10g0813 10 6738653 6740336 ECH