Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aed10g0813 | ATGAACACGGGCTTTGTCGAGAGGGGATCCAATTTGATTTCATCTGCTCCATCAGACGAGTATGTGAATGTTTCCAGGTGGTACAAGCACATTGATGCTTTGTTGAGAATCTCTGGTGTTTCTGGCGAGGGATCTGGTGTTACTGTTGAGGGATCTCTTGTTGCGGAGCCTGTTGCAACTCCCCCAGCTGCTGACACAAAGGCAAGTGTTCTACTAATGATACCTGCGGCTGCTGCTGAGGATGACGACGATGATGATGTGGATTTGTTTGGTGAAGAGACAGAAGAAGAGAAGAAGGCGGCTGAGGATCGGGCAGCTGCAGTGAAGGCATCTACAAAAAGAAAGAGTGTAAGTTTCTTTTCTCTTGCCACTATAGTATTTAAAGTTTCTCCGCCTCATCCCCTGACTATACTACTTTTTGAGGTGATTGACTTTCTCCTGATTCTGGTTTCAGCTGGGAAATCATCTGTTCTGTTGGATGTGAAACCATGGGATGATGAAACTGACATGAAAAAGCTTGAAGAAGCAGTGAGATCTGTTGAGATGGAAGGATTGCTTTGGGCCAAACTTGTTCCTGTTGGGTACGGTATCAAGAAGCTTTGTATTATGCTTACCATTGTGGATGACCAAGTTTCTGTTGATTCTCTTATTGAGGACCGTCTCACAGTTGAGCCCATCAGTGAATATGTCCAGAGTTGTGACATTGCGGCCTTCAATAAAATATGTCTATAA | 732 | 0.444 | MNTGFVERGSNLISSAPSDEYVNVSRWYKHIDALLRISGVSGEGSGVTVEGSLVAEPVATPPAADTKASVLLMIPAAAAEDDDDDDVDLFGEETEEEKKAAEDRAAAVKASTKRKSVSFFSLATIVFKVSPPHPLTILLFEVIDFLLILVSAGKSSVLLDVKPWDDETDMKKLEEAVRSVEMEGLLWAKLVPVGYGIKKLCIMLTIVDDQVSVDSLIEDRLTVEPISEYVQSCDIAAFNKICL | 243 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aed10g0813 | 243 | Coils | Coil | 91 | 111 | - | - | |
Aed10g0813 | 243 | SMART | EF1_GNE_2 | 154 | 241 | IPR014038 | GO:0003746|GO:0006414 | |
Aed10g0813 | 243 | Pfam | EF-1 guanine nucleotide exchange domain | 156 | 241 | IPR014038 | GO:0003746|GO:0006414 | |
Aed10g0813 | 243 | ProSitePatterns | Elongation factor 1 beta/beta'/delta chain signature 1. | 83 | 91 | IPR001326 | GO:0003746|GO:0005853|GO:0006414 | |
Aed10g0813 | 243 | PANTHER | EF-HAND AND COILED-COIL DOMAIN-CONTAINING FAMILY MEMBER | 13 | 118 | - | - | |
Aed10g0813 | 243 | SUPERFAMILY | eEF-1beta-like | 153 | 241 | IPR036219 | - | |
Aed10g0813 | 243 | ProSitePatterns | Elongation factor 1 beta/beta'/delta chain signature 2. | 230 | 241 | IPR001326 | GO:0003746|GO:0005853|GO:0006414 | |
Aed10g0813 | 243 | PANTHER | RIPENING REGULATED PROTEIN DDTFR10-LIKE | 13 | 118 | - | - | |
Aed10g0813 | 243 | PANTHER | RIPENING REGULATED PROTEIN DDTFR10-LIKE | 152 | 242 | - | - | |
Aed10g0813 | 243 | Gene3D | - | 150 | 241 | IPR014717 | - | |
Aed10g0813 | 243 | PANTHER | EF-HAND AND COILED-COIL DOMAIN-CONTAINING FAMILY MEMBER | 152 | 242 | - | - | |
Aed10g0813 | 243 | CDD | EF1B | 152 | 241 | IPR014038 | GO:0003746|GO:0006414 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aed10g0813 | Aed-Chr10 | 6738653 | 6740336 | Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aed10g0813 | 13 | 241 | Eukaryotic Initiation Factors Gene Family | AT2G18110 | 62.661 | 1.97e-73 | 221 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aed10g0813 | K03232 | - | gmx:100777627 | 261.151 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Aed10g0813 | 10 | 6738653 | 6740336 | Aed10g0813 | 10 | 6738653 | 6740336 | ECH |