Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0811 TTAGGGTTTCAGTCTCAAGCCAATAAAAAGAGGTCAATCGGTATTTTCACTCTCCTTCTCTCCTTCGCTCGTTTGTGCTGCCTTTGTTTGCGTTTCTCACACAGAAGAATTAACATATATATAGCAAGCATGGCAGTCACATTCTACGACCTTAGCTCTGCCTCTGGCTTGAAGAAGCTTGAGGAGTACCTTCTCCCACGCAGTTACATCACTGGGTACCAAGCTTCAAAGGACGATCTTACCGTTTATGCAGCTCTTTCATCTGCTCCATCAGACGAGTATGTGAATGTTTCCAGGTGGTACAAGCACATTGATGCTTTGTTGAGAATCTCTGGTGTTTCTGGCGAGGGATCTGGTGTTACTGTTGAGGGATCTCTTGTTGCGGAGCCTGTTGCAACTCCCCCAGCTGCTGACACAAAGGCAAGTGTTCTACTAATGATACCTGTGATTGGTTTCATGTTTTCTTCCCACATTGCGGCTGCTGCTGAGGATGACGACGATGATGATGTGGATTTGTTTGGTGAAGAGACAGAAGAAGAGAAGAAGGCGGCTGAGGATCGGGCAGCTGCAGTGAAGGCATCTACAAAAAAGAAAGAGTCTGGGAAATCATCTGTTCTGTTGGATGTGAAACCATGGGATGATGAAACTGACATGAAAAAGCTTGAAGAAGCAGTGAGATCTGTTGAGATGGAAGGATTGCTTTGGGGTGCATCCAAACTTGTTCCTGTTGGGTACGGTATCAAGAAGCTTTGTATTATGCTTACCATTGTGGATGACCAAGTTTCTGTTGATTCTCTTATTGAGGACCGTCTCACAGTTGAGCCCATCAGTGAATATGTCCAGAGTTGTGACATTGCGGCCTTCAATAAAATATAA 876 0.4486 LGFQSQANKKRSIGIFTLLLSFARLCCLCLRFSHRRINIYIASMAVTFYDLSSASGLKKLEEYLLPRSYITGYQASKDDLTVYAALSSAPSDEYVNVSRWYKHIDALLRISGVSGEGSGVTVEGSLVAEPVATPPAADTKASVLLMIPVIGFMFSSHIAAAAEDDDDDDVDLFGEETEEEKKAAEDRAAAVKASTKKKESGKSSVLLDVKPWDDETDMKKLEEAVRSVEMEGLLWGASKLVPVGYGIKKLCIMLTIVDDQVSVDSLIEDRLTVEPISEYVQSCDIAAFNKI 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0811 291 SUPERFAMILY eEF-1beta-like 199 291 IPR036219 -
Aed10g0811 291 ProSitePatterns Elongation factor 1 beta/beta'/delta chain signature 1. 166 174 IPR001326 GO:0003746|GO:0005853|GO:0006414
Aed10g0811 291 Coils Coil 174 194 - -
Aed10g0811 291 CDD EF1B 200 291 IPR014038 GO:0003746|GO:0006414
Aed10g0811 291 PANTHER ELONGATION FACTOR 1-DELTA 1-RELATED 44 142 - -
Aed10g0811 291 PANTHER ELONGATION FACTOR 1-DELTA 1-RELATED 159 291 - -
Aed10g0811 291 ProSitePatterns Elongation factor 1 beta/beta'/delta chain signature 2. 280 291 IPR001326 GO:0003746|GO:0005853|GO:0006414
Aed10g0811 291 Gene3D - 195 291 IPR014717 -
Aed10g0811 291 Gene3D - 34 121 - -
Aed10g0811 291 Pfam EF-1 guanine nucleotide exchange domain 204 291 IPR014038 GO:0003746|GO:0006414
Aed10g0811 291 SMART EF1_GNE_2 202 291 IPR014038 GO:0003746|GO:0006414
Aed10g0811 291 PANTHER EF-HAND AND COILED-COIL DOMAIN-CONTAINING FAMILY MEMBER 44 142 - -
Aed10g0811 291 PANTHER EF-HAND AND COILED-COIL DOMAIN-CONTAINING FAMILY MEMBER 159 291 - -
Aed10g0811 291 SUPERFAMILY GST C-terminal domain-like 51 110 IPR036282 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0811 Aed-Chr10 6716119 6718598 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0811 48 291 Eukaryotic Initiation Factors Gene Family AT2G18110 73.577 1.91e-107 310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0811 K03232 - gmx:100777627 364.77