Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0801 ATGGAGAACAACAACAACAACAACCAGCAAGGCGCACAAGCTCAATCGGGACCGTACGGCGGAGGAGCAGCAGCGGGGAGTGCAGGTGCAGGTGCAGGCGCAGGCGCAGGCGCGCCACCGTTCCAGCACCTACTCCACCAGCAGCAGCAGCAGCTCCAGATGTTCTGGTCCTACCAGCGTCAAGAGATCGAGCACGTGAACGACTTCAAGAACCACCAGCTCCCGTTGGCACGCATCAAGAAGATCATGAAGGCCGACGAGGACGTCCGCATGATCTCCGCGGAAGCCCCCATCCTCTTCGCCAAGGCCTGCGAGCTCTTCATCCTCGAGCTCACCATCCGCTCCTGGCTCCACGCCGAGGAGAACAAGCGCCGCACCCTCCAGAAGAACGACATCGCCGCCGCCATCACCCGCACCGACATTTTCGACTTCCTTGTCGATATCGTCCCCCGGGATGAGATCAAGGACGACGCCGCACTCGTCGGGGCGACTGCCAGTGGTGTTCCTTACTACTACCCGCCCATTGGCCAGCCTACCGGGATGATGATTGGCCGCCCCGCTGTTGATCCCACCACCGGTGTTTATGTCCAGCCGCCCTCCCAGGCCTGGCAGTCCGTCTGGCAGTCCTCCGCCGAGGACGCCTCCTACGGCACCGGCCCTGCCGGTGATGGCCAGAGAACTAGTGTCCTATTGACTCAATGCCTCAATCAACTGAGTAACAATGATGCTGATGATGGTCAGAGTTATGAAGATTCTGAACTTGCTTGGAATTTTGATTGCTTGCAATTTAGAAATGGTTCTGTTAACTAA 810 0.5852 MENNNNNNQQGAQAQSGPYGGGAAAGSAGAGAGAGAGAPPFQHLLHQQQQQLQMFWSYQRQEIEHVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDDAALVGATASGVPYYYPPIGQPTGMMIGRPAVDPTTGVYVQPPSQAWQSVWQSSAEDASYGTGPAGDGQRTSVLLTQCLNQLSNNDADDGQSYEDSELAWNFDCLQFRNGSVN 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0801 269 SUPERFAMILY Histone-fold 48 145 IPR009072 GO:0046982
Aed10g0801 269 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 6 225 - -
Aed10g0801 269 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-4 6 225 - -
Aed10g0801 269 Gene3D Histone, subunit A 40 151 IPR009072 GO:0046982
Aed10g0801 269 MobiDBLite consensus disorder prediction 1 16 - -
Aed10g0801 269 MobiDBLite consensus disorder prediction 1 34 - -
Aed10g0801 269 Pfam Core histone H2A/H2B/H3/H4 62 136 IPR007125 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0801 Aed-Chr10 6632907 6636519 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0801 5 210 CCAAT-HAP5 Transcription Factor Family AT3G48590 75.814 1.20e-102 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Aed10g0801 CBFD_NFYB_HMF 3.2e-17 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0801 - - gmx:100818447 346.28