Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0792 ATGGAGAAACACCATCAAGTGATGATGCTCCCTACTTCATCTAGTACTACTCCTTTTTCATCTGATTTTAAAGTTGATTATATTAATAATTCTACTGTTCATGTTGAGAATGATGAGGTTTTAAGGAAGGCCATAATATCATCATCAGCGCAGAACGAAAGAGAGAAAGAGATTAGGCAGCGCAGATATGTATTTCAAACAAAGAGTCCTGTTGATGTTCTTGACGATGGATACCAGTGGAGAAAATATGGGAAAAAGATAGTCAAAAACAATAAATTCCCAAGAAGTTACTACAAGTGCTCTCATAGAAATTGCGATGTCAAGAAACAAATCCAACGCCATCCCCAGGATGAACAGATTGTGGTAACAACCTACGAAGGAACACATACACACCCTGTTGACAAGTCAACGGAAAGCTTCGACCAAATCTTGGGAAACCTACTCATAACCAACCTAATATATACTAAAAATTTAAGGGGAAATCCCCATCCTACGACCTAG 501 0.3812 MEKHHQVMMLPTSSSTTPFSSDFKVDYINNSTVHVENDEVLRKAIISSSAQNEREKEIRQRRYVFQTKSPVDVLDDGYQWRKYGKKIVKNNKFPRSYYKCSHRNCDVKKQIQRHPQDEQIVVTTYEGTHTHPVDKSTESFDQILGNLLITNLIYTKNLRGNPHPTT 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0792 166 Pfam WRKY DNA -binding domain 75 132 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed10g0792 166 Gene3D WRKY domain 59 134 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed10g0792 166 PANTHER WRKY FAMILY TRANSCRIPTION FACTOR 6 150 - -
Aed10g0792 166 SUPERFAMILY WRKY DNA-binding domain 67 133 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed10g0792 166 ProSiteProfiles WRKY domain profile. 69 134 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed10g0792 166 SMART WRKY_cls 74 133 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed10g0792 166 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 6 150 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0792 Aed-Chr10 6572120 6573124 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0792 61 149 WRKY Transcription Factor Family AT5G13080 64.045 3.60e-42 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aed10g0792 WRKY 1.8e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0792 - - gmx:100796070 236.884