Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0785 ATGTCTAGTAGCATTGAACTTAACGTGAAGCGAGGAGAACCAAGTCGGGTTCAGCCCGCAGATCAGGAAACAAGAACAGATAAGAAGGGACTCTACTTCCTCTCAAACCTGGACCAGAACATCGCTGTTCCGGTGTGCACCGTTTACTGCTTCAAATCGGGTTCGAGAGGAAACGAGGATGCTGCGCGAGTCATAAAGGACGCGCTGTCGAAGGTTCTTGTCCCTTACTACCCGATGGCGGGAAAGTTGATTGTGAGCATCGACGGGAAGTTGATAGTGGATAATGACCGCGGCGAGGGTGCGGTGTTTGTTGAGGCTGAGGCGGATTCTGAGATAGAAGAGATTGGAGATTTCACGAAGCCTGACCCTACTAATCTTCGCAAACTTGTCTACACCGTTCCTGATGCTCCCACCATTCTTCAGATGCCTCTCATCACTGTTCAGGTGACAAAGTTCAAATGCGGAGGATTTACGTTGGGTCTATGCATGATCCACTGCATGAAAGATGGACTCTGCGCCATGGAGTTCGTGAACGCATGGAGTGTCACAGCACGAGGTTTGGACCTAAAGATCCAACCTTTTCTCGATCGAACCATAATCAAAGCACGTGACCCTCCCAAGATAGAGTTCCAGCACCACGAGTTCGCCGAAATAGAAGACATATCCAACACCAAAAAGCTCTACGAGGAAGAAGCCACGCTCTACAAATCCTTCTGCTTCGACCCAGAGAAGCTCGACGCGCTAAAAAAAAAGGCCACAGAAGACGGTGTTCTGGAAAAGTGCTCAACTTTCGAAGCACTCTCGGGGTTCGTGTGGAGGGCTCGAACCGCATCGCTAAGGATGCAGCCTGAGCAACAAACGAAACTTCTCTTCGCGGTTGATGGAAGGAAGAGATTCGTGCCACCGATACCGGAAGGGTACTTTGGGAATGCTATTGTGTTGACGAACTCGCTGTGCAAGGCTGGGGAGTTGTTGAATAACCCTTTGTCGTTTTCTGTTGGGTTGGTTCGTGAAGCTATTGAGATGGTTACCGATGGTTACATGAGATCTGCGATTGATTTTTTTGAAGTGACCAGGGCGAGGCCTTCTTTGACGGGCACGCTTCTGATCACGACTTGGACTAAGTTGTCTTTTCACACCACGGATTTTGGTTGGGGGGAGCCTCTGTGCTCTGGGCCTGTGACGTTGCCGGAGAAAGAAGTGATTTTGTTTCTTTCGCAGGGTCGAGAGAGGAAGAGCGTGAATGTTCTTCTGGGTTTGCCTAGTTCTGCTATGGAGATTTTTGAAGCATTGGTCGATGATGCAGGTGTGACCGTGTGA 1320 0.497 MSSSIELNVKRGEPSRVQPADQETRTDKKGLYFLSNLDQNIAVPVCTVYCFKSGSRGNEDAARVIKDALSKVLVPYYPMAGKLIVSIDGKLIVDNDRGEGAVFVEAEADSEIEEIGDFTKPDPTNLRKLVYTVPDAPTILQMPLITVQVTKFKCGGFTLGLCMIHCMKDGLCAMEFVNAWSVTARGLDLKIQPFLDRTIIKARDPPKIEFQHHEFAEIEDISNTKKLYEEEATLYKSFCFDPEKLDALKKKATEDGVLEKCSTFEALSGFVWRARTASLRMQPEQQTKLLFAVDGRKRFVPPIPEGYFGNAIVLTNSLCKAGELLNNPLSFSVGLVREAIEMVTDGYMRSAIDFFEVTRARPSLTGTLLITTWTKLSFHTTDFGWGEPLCSGPVTLPEKEVILFLSQGRERKSVNVLLGLPSSAMEIFEALVDDAGVTV 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0785 439 MobiDBLite consensus disorder prediction 1 24 - -
Aed10g0785 439 Gene3D - 3 217 IPR023213 -
Aed10g0785 439 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 8 432 - -
Aed10g0785 439 Gene3D - 218 433 IPR023213 -
Aed10g0785 439 PANTHER OMEGA-HYDROXYPALMITATE O-FERULOYL TRANSFERASE 8 432 - -
Aed10g0785 439 Pfam Transferase family 17 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0785 Aed-Chr10 6513325 6515703 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0785 5 432 Monolignol Biosynthesis Gene Families AT5G48930 36.404 1.74e-89 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0785 K15400 - gmx:100794490 742.651
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0785 10 6513325 6515703 Aed10g0785 10 6513325 6515703 ECH