Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0772 ATGAAGAGACCAACATGGAAGTCCAAGTCAAAGTCCAACACCATGGCAATGGCTGTGGTGTTGCTTCACCTGAGTTTTTCCATGGAGGTGTTGTTCTGCCACCCTCTTCATGCAGACACAATTGCTGAGCTTCCTGGCCAACCCTACGTAGGCTTTCAACAGTTCTCAGGATATGTCACAGTGAATGAAAAGAAACACAAGTCTCTCTTTTACTATTTTGCTGAGGCAGAAACTGATCCATCTTCAAAGCCTCTTGTTCTTTGGCTCAATGGAGGACCTGGTTGTTCTTCTCTGGGAGTGGGAGCATTCTCAGAAAATGGACCCTTCAGACCAAATGGAGAATTTCTGATTAAAAATGATTTTAGTTGGAATAAAGAGGCAAACATGCTGTATTTGGAGACACCAGTTGGAGTGGGGTTCTCTTATGCTAAAGGTAGCTCCTCCTATATGACAGTGAATGATGAGGCAACAGCCAGGGACAACCTTGTATTCCTGCTACGCTGGTTCAACAAGTTCCCTCAATACAGGAGCAGAGATTTGTTTCTAACTGGGGAAAGCTATGCAGGTCATTATGTTCCTCAACTTGCAAAGCTCATGATTGAAATGAACACAAAGAACAAGATATTATTCAATCTGAAAGGCATTGCCTTGGGTAATCCAGTTCTAGAATATGCCACCGACTTCAATTCAAGGGCTGAGTTCTTCTGGTCTCATGGACTAATATCAGATTCAACCTTCAACATGTTCACCACAGTGTGCAACTATTCTAGATACGTGAGTGAGTACTATAGGGACTCAATTTCACCTCTTTGTTCAAAGGTTATGGGCCAAGTGAGCAGAGAAACCAGTAAATTTGTGGACAAATACGATGTCACACTTGATGTTTGCATTTCCTCAGTGCTATCGCAATCCAAGATTATTAGTCCTCAATCCCAAGAAGCAAATGAGAGCATAGATGTGTGTGTAGATGACAAGGTTACAAACTACTTAAACCGGAGAGATGTACAAGAGGCACTTCATGCAAAGCTCGTCGGCGTTCGCAAGTGGGATGTTTGCAGCAACATTTTGGACTATGATATGCTCAACGTGGAAGTTCCTACACTCCCAGTTGTTGGATCACTGATAAAAGCTGGAGTTAAGGTCTTAATTTACAGTGGAGATCAAGATTCGGTAATTCCACTGACTGGAAGCCGTACCTTAGTTCAGAAGTTGGCAAGACAATTAGGACTGAACACAACAGTGCCTTACAGAGTATGGTTTGAGGGCCAGCAGGTTGGTGGGTGGACTCAAGTATATGACAATATCCTCTCGTTTGCCACTATTAGAGGTGCCTCCCATGAAGCCCCTTTCTCACAACCTGAAAGATCACTTGTGCTGTTCAGGTCATTCTTGGATGGCAGGCCTTTACCTGATGCTTTCTGA 1422 0.4353 MKRPTWKSKSKSNTMAMAVVLLHLSFSMEVLFCHPLHADTIAELPGQPYVGFQQFSGYVTVNEKKHKSLFYYFAEAETDPSSKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGEFLIKNDFSWNKEANMLYLETPVGVGFSYAKGSSSYMTVNDEATARDNLVFLLRWFNKFPQYRSRDLFLTGESYAGHYVPQLAKLMIEMNTKNKILFNLKGIALGNPVLEYATDFNSRAEFFWSHGLISDSTFNMFTTVCNYSRYVSEYYRDSISPLCSKVMGQVSRETSKFVDKYDVTLDVCISSVLSQSKIISPQSQEANESIDVCVDDKVTNYLNRRDVQEALHAKLVGVRKWDVCSNILDYDMLNVEVPTLPVVGSLIKAGVKVLIYSGDQDSVIPLTGSRTLVQKLARQLGLNTTVPYRVWFEGQQVGGWTQVYDNILSFATIRGASHEAPFSQPERSLVLFRSFLDGRPLPDAF 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0772 473 SUPERFAMILY alpha/beta-Hydrolases 43 470 IPR029058 -
Aed10g0772 473 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 34 471 IPR001563 GO:0004185|GO:0006508
Aed10g0772 473 ProSitePatterns Serine carboxypeptidases, serine active site. 182 189 IPR018202 GO:0004185
Aed10g0772 473 ProSitePatterns Serine carboxypeptidases, histidine active site. 436 453 IPR033124 GO:0004185
Aed10g0772 473 PANTHER CARBOXYPEPTIDASE 34 471 - -
Aed10g0772 473 Gene3D alpha/beta hydrolase 36 298 IPR029058 -
Aed10g0772 473 Gene3D - 321 357 - -
Aed10g0772 473 PRINTS Carboxypeptidase C serine protease (S10) family signature 132 142 IPR001563 GO:0004185|GO:0006508
Aed10g0772 473 PRINTS Carboxypeptidase C serine protease (S10) family signature 119 131 IPR001563 GO:0004185|GO:0006508
Aed10g0772 473 PRINTS Carboxypeptidase C serine protease (S10) family signature 436 449 IPR001563 GO:0004185|GO:0006508
Aed10g0772 473 PRINTS Carboxypeptidase C serine protease (S10) family signature 168 193 IPR001563 GO:0004185|GO:0006508
Aed10g0772 473 Gene3D - 367 466 - -
Aed10g0772 473 Pfam Serine carboxypeptidase 46 466 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0772 Aed-Chr10 6354713 6358070 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0772 329 469 Calmodulin-binding Proteins AT2G22960 29.078 3.03e-16 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0772 K16297 - gmx:100795668 899.427
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0772 10 6354713 6358070 Aed10g0772 10 6354713 6358070 ECH