Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0771 ATGGCCACAGAGCAACAAAAGCAGGATCCCGCGGCAATCACCAACTCTTTGCAAAGCCAAAACCAAACCCAGGAATTGCAGGGTAAAGGTGAAGAAGTGGAAAAGGAGGAGGAGGAGGAGGAGGAGGCTGAGACCCCTTTGACTCTCAGCGTTACTTACAAGGTTTTGCACATGTTGGGAGACATCACAGCAGGGCCTGCATCTATGTTCTCTCAATGGCTCCAATTAGTTCGTAAACGCACTTCCAACTCTCGCACCTCTGGCTTTCCTCGCCGTTCTTCCAGCATGCCTTCTAGCCCGGGAGAATCTATTGAGGATGCGAAGAATGATCAACAAACAGAAATTAATTTATGGGAGAGGCTTGGTAAAGCCGAAATGTTGGACATTGAGTCGAGCTCATTTTCTTGGGATAGTCTCTCTTCACTTCACCACACTGAACACACTAGCAGCATTGAACATTCTGAGGATGAAACAAACCGTGTTCTTGAGGTAACAGTAAATTCTGGAGGGGTAGTCTTCTTTGCCTTTTTCAATGGTCTTGGGAGTGACGATGCTTCTCCAAAAGAGACAGCTGCTGTTATAAAGATATCATCATCAAGAATGGCAACACAATCCGAACGTCTTGGTTATGAATTCGCCAAGTGGTTGGGAGTCCAAACTCCGCAGGTTATCCTCTTCTTTCTTTATCTGATTGACCTTCCAAATTGCAGGCTTAGACTATCAAACTGTATTTCTGCTAAATTCTTCGATTACTTATATTGTGAATACAAGGCTAGAGTCATCCACAATACAAGTTTAGAGTGGATCCAAATAAAGGAAGCTACAGAAAAAGCAAGGCATGCTGCAAGTTTTGCAGGCGATGAAATTGGTGAAATGACATGCACAGAACTTTTGGAAGCACTTGAACTTAGCCGATGTCTCATGTTTATGAGCTATGTGCACGGTTCACCCTTGCTTGAAAGCTCTAGAGCATTTGAAACGCAGGAATTTGCAGAACGAACATCAGCAGCCCTTGGCAGGATAATGTTGCTAGACCTTGTCATCAGAAATGAAGATAGGCTCCCTTGCCCTCAGCTTAGATGGCGTGGGAACTCTGCAAATTTATTATTGGCTGAAAAGATAATCTCAAGTACAGATAAAACAGGAGAAACTCCTGATTCTTCAATGAACAAATATGGACCGAGAGTGAGTAGGGGATTTCAAAAAGAAAAAAGGTCAACTTCAATGGATAGTAGATTGAATTCTCATAATTCTGGACTGGTATCACAAGTCTCTGGTCTTTCTGACATGAGTTTTAAAAGCCAATCGTCATTAGAATCAATGCTTACTGACTTCATTGTGGCCATTGATTCTGGTGTTCCTCGCCGACCCCCTGCTGGAAAACGTGCTGATGATCAGGTTAATTATCCAAAGTTGGTTGAGTTACTACTCAATAGCTCAGAGTTTTCCTCTGACCTGTTACATGATATAAGCGGAGGGAGACTAGGATTTCCTCATCCAGAAGACACAAATACAATCACTGATGTTCATAACACTACTGATGTTACATCAGTAGTTCATGCGTTCCGTAGTGGTTTTCGTGCTGCTCTCAGGGATCTGCAGGGATTCCATATATTCCTACTCAAACTGCATCAAAAACTTGATAATTTTTTAAAATCATTTATGAATGCTATGGGCAAAATATCATCAGGGGAGTCTGAAAAAGAGGATGCAGTGGTTCCTGACTCACCTTCACCCACTGTTGTTGGTAGTTGTCCCTCTCCATCTAGTAAGGAAAGGCTTTCTAATGATATCCATCAAGATTGTAGTGATTCAGAATCTCAAAGAACTGCTCCAAGGGCATCATCATCTTCAAGCAGTAGAGATTGTTGCGACTCTGCTTCTTCTGTGTCAAGAGAAAATTGGCATGGAAAACACACTAAAGGAAGCATGGAGTCTATTCGTAGTCACCGCTTGACAACTAAACTCCGTGACTTACATAAATTTGCCAAGGTTGACTCAGAATCCAATAAAGAATTGGAACAATGGAATGAAATGCTTAAAAATGATGTGGTCAAGTTATGTTTGGAGAACTATTTTAACACAGGATTTTTCGAGGGTAGTGATAACAACACTGTTGTTGATGCATATGAACTGAAGGTCAGACTTGAGCATATCCTTGAGAGGATTGCTTTGATATCTGAGGCTGCAAATACAGAGAGACCATCTGCGGTTACAAATAGTGTGTTTATTGGTGGAGCACTGGCTGCGAGATCTACATATACACTGCAACGTTTGGGAATCACGCATATTTTATGTTTGTGTACAAATGAAATTGGCCAATCAGATTCTCAATTTCCTGATCTATTCATGTACAAAAATTTCTTTGTGTGTGACGAGGAAGATTCTAACATCAGCAGCATATTTGAAGAGGCCTGTTGTTTTATAGATTATGTTGAACAAGTTGGTCAGAGTGTTTTAGTTCATTGCTTCGAGGGGAAAAGCAGAAGTGCCACTTTAGTCCTTGCTTACCTGATGCTTAGGAAGAAATTCACTTTGTTAGAAGCATGGAATGCTCTAAAACGAGTTCATCGCCGATCTCAGCCCAACGATGGTTTTGCAAAGATCTTGCTTGAACTGGACCGGAAACTGCACGGGAAGGTTTCAATGGAGTGGCAGCAGCGGAAACCAATGATGAAAATTTGCCCCATCTGTGGCAAGAATGCTGGACTAAGCAGTAGCTCGCTTACACTCCATCTTCAGAAATCACACAAAAAGCTGTCATCGGGGAGTGTGGATAGTGCCATGACAATGGAGATCCAGAAGGCATTGACAACTTTGAATATTAGCCGTGGTGGGAGTGTCAGCCCCAAACCAAGGCAGTCTCATTCAATGATAGATGCATAG 2886 0.4224 MATEQQKQDPAAITNSLQSQNQTQELQGKGEEVEKEEEEEEEAETPLTLSVTYKVLHMLGDITAGPASMFSQWLQLVRKRTSNSRTSGFPRRSSSMPSSPGESIEDAKNDQQTEINLWERLGKAEMLDIESSSFSWDSLSSLHHTEHTSSIEHSEDETNRVLEVTVNSGGVVFFAFFNGLGSDDASPKETAAVIKISSSRMATQSERLGYEFAKWLGVQTPQVILFFLYLIDLPNCRLRLSNCISAKFFDYLYCEYKARVIHNTSLEWIQIKEATEKARHAASFAGDEIGEMTCTELLEALELSRCLMFMSYVHGSPLLESSRAFETQEFAERTSAALGRIMLLDLVIRNEDRLPCPQLRWRGNSANLLLAEKIISSTDKTGETPDSSMNKYGPRVSRGFQKEKRSTSMDSRLNSHNSGLVSQVSGLSDMSFKSQSSLESMLTDFIVAIDSGVPRRPPAGKRADDQVNYPKLVELLLNSSEFSSDLLHDISGGRLGFPHPEDTNTITDVHNTTDVTSVVHAFRSGFRAALRDLQGFHIFLLKLHQKLDNFLKSFMNAMGKISSGESEKEDAVVPDSPSPTVVGSCPSPSSKERLSNDIHQDCSDSESQRTAPRASSSSSSRDCCDSASSVSRENWHGKHTKGSMESIRSHRLTTKLRDLHKFAKVDSESNKELEQWNEMLKNDVVKLCLENYFNTGFFEGSDNNTVVDAYELKVRLEHILERIALISEAANTERPSAVTNSVFIGGALAARSTYTLQRLGITHILCLCTNEIGQSDSQFPDLFMYKNFFVCDEEDSNISSIFEEACCFIDYVEQVGQSVLVHCFEGKSRSATLVLAYLMLRKKFTLLEAWNALKRVHRRSQPNDGFAKILLELDRKLHGKVSMEWQQRKPMMKICPICGKNAGLSSSSLTLHLQKSHKKLSSGSVDSAMTMEIQKALTTLNISRGGSVSPKPRQSHSMIDA 961
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0771 961 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 248 960 IPR035010 GO:0004721|GO:0009737|GO:0043622
Aed10g0771 961 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 24 222 IPR035010 GO:0004721|GO:0009737|GO:0043622
Aed10g0771 961 MobiDBLite consensus disorder prediction 84 110 - -
Aed10g0771 961 ProSitePatterns Tyrosine specific protein phosphatases active site. 821 831 IPR016130 GO:0016311|GO:0016791
Aed10g0771 961 Coils Coil 19 43 - -
Aed10g0771 961 MobiDBLite consensus disorder prediction 563 628 - -
Aed10g0771 961 PANTHER DUAL SPECIFICITY PHOSPHATASE FAMILY PROTEIN 248 960 - -
Aed10g0771 961 PANTHER DUAL SPECIFICITY PHOSPHATASE FAMILY PROTEIN 24 222 - -
Aed10g0771 961 MobiDBLite consensus disorder prediction 1 46 - -
Aed10g0771 961 MobiDBLite consensus disorder prediction 1 27 - -
Aed10g0771 961 MobiDBLite consensus disorder prediction 379 417 - -
Aed10g0771 961 MobiDBLite consensus disorder prediction 607 628 - -
Aed10g0771 961 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 792 855 IPR000387 GO:0016311|GO:0016791
Aed10g0771 961 SMART dsp_5 734 876 IPR020422 GO:0006470|GO:0008138
Aed10g0771 961 Pfam Dual specificity phosphatase, catalytic domain 749 875 IPR000340 GO:0008138|GO:0016311
Aed10g0771 961 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 734 879 IPR029021 -
Aed10g0771 961 Pfam Actin-fragmin kinase, catalytic 257 447 IPR015275 -
Aed10g0771 961 Pfam Actin-fragmin kinase, catalytic 114 223 IPR015275 -
Aed10g0771 961 CDD DSP 735 872 - -
Aed10g0771 961 MobiDBLite consensus disorder prediction 84 106 - -
Aed10g0771 961 Gene3D Protein tyrosine phosphatase superfamily 717 889 IPR029021 -
Aed10g0771 961 ProSiteProfiles Dual specificity protein phosphatase domain profile. 734 879 IPR020422 GO:0006470|GO:0008138
Aed10g0771 961 SUPERFAMILY Protein kinase-like (PK-like) 72 466 IPR011009 -
Aed10g0771 961 Gene3D - 317 454 IPR036940 GO:0016301
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0771 Aed-Chr10 6335931 6343346 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0771 34 945 Protein tyrosine phosphatase (PTP) family AT5G23720 60.085 0.0 1058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0771 K14165 - gmx:102661225 1578.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0771 10 6335931 6343346 Aed10g0771 10 6335931 6343346 ECH