Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0768 ATGGCATCATCGGAGGTCACGATGAACGGAAATTGCTTGAACCACAACGACGCCGGAGCTGCTGAGCCTCATTCGCCGTCCACGGCCAAAGACGCAGAAGCTGCACTTTTCAGGGAGCTATGGCACGCTTGTGCCGGTCCTCTAGTCACGGTACCGCGAGAAAAAGAGCGCGTGTTTTATTTCCCGCAGGGACATATTGAGCAGGTGGAGGCGTCCACAAACCAGGTTGCGGACCAGCACATGCCGGTTTACGATCTCCCACCCAAGATCCTCTGTCGGGTCATCAACGTGCAGCTGAAGGCCGAGCCCGATACGGATGAGGTGTTTGCTCAGGTGACTTTGCTTCCGGAGCCAAATCAAAATGAGAATGCCGTGGAGAAAGAACCTCCGCCACCACCACCGCCTCGGTTTCACGTTCATTCTTTCTGTAAGACTCTGACGGCGTCTGATACCAGTACCCATGGTGGGTTTTCTGTGCTGAGACGGCATGCTGATGAATGTCTTCCTCCTCTGGATATGTCGAAGCAGCCACCCACACAGGAATTGGTGGCTAAGGATCTTCATGCGAATGAATGGCGATTTAAACATATCTTTCGAGGTGAGAATGGGGAACTTCGTGTTGGTGTCCGACGTGCAATGAGACAGCAGGGTAATGTTCCATCCTCAGTTATCTCCAGCCACAGCATGCATCTCGGGGTCCTTGCAACTGCTTGGCATGCCATCTTGACGGGGACCATCTTCACTGTTTATTACAAGCCTAGGACCAGTCCCGCCGAATTTATTGTTCCATATGATCAGTATATGGAGTCTCTCAAAAATAGTTATAGCATCGGGATGCGGTTCAAAATGAGGTTCGAAGGTGAAGAAGCTCCAGAGCAGAGGTTTACCGGTACCATTGTGGGAATGGAAGATTCTGATCCCAACAGGTGGAGAGATTCCAAATGGAGATGCCTCAAGGTGAGATGGGATGAAATATCCAACACCCCTCGTCCAGAGAGAGTTTCCCCTTGGAAAATAGAGCCTGCTCTTGCTCCCCCGGCTCTAAATCCTCTTTCAATGCCCAGGCCTAAAAGACCTCGGTCTAATGCAGTTCCTTCATCCCCAGATTCTTCTGTTCTTACTCGAGAAGCATCATCGAAAGCAAGCATAGACCCTTCACCGGCAAATGGATTTCCAAGGGTCTTGCAAGGTCAAGAATTCTCGACCTTGAGAGGCAATTTTGCAGAAGGTAATGAGTGTGATACTGCTGAGAAGTCTGTTGTTTGGCCACCTGCTGCAGTAGATGATGAAAAGATTGATGTTTCTACTTCAAGGAGGTATGTTTCTGAGAGCTGGATGTCAATGGGGAGGAGTGAGCCTACATATTCGGATCTTCTTTCGGGCTTTGGGGCCAGTGGGGATCCTTCTCATTCATCCTTCATGGATCAGATGAGCCCTGCTTATTCTGCTAGAAAGCAATCAATGGATCATGAAGGCAAACTTCACATGCCTCATCCGTGGCCTGTAATGCCCTCTAGTCTGTCACTGAACATCTTGGACTCTAATACAAAAGGTCCTGCACATGGTGGTGATACAACTTACCAATCTCGAGGGAATTTGAGGTACAGTGCATTTGGTGAATACCCTGCACTACATGGTCATAAAGTTGAGCATTCACATGGAAAATTGATGCCACCCCCACCTGCACCCGTAACTCAATATCAGAGTCCTTGTTCAAGAGAGCTTATGTCAAAATCAGTGTCAGTAAAAACTAGTGAGGCTGTGAAACCAAAAGATAGTGACTGTATGCTATTTGGCTTTTCACTTATCAGTGGCCCCACTGGACCAGAGCCTTCTTTATCTCAAAGAAACGTGAGCGAGCCTGCTGGTCAGATGCATCTTGCACCACACCAACAAAGAACATCTGAAACTGAGGAGAAGTCAGACCACTCAAAAGGTGCAAGACCTGCAGTTGATCTAGTTCACAAGAAGGGCATTGCACTTGGTAGGTCAGTGGACCTTGCAAAGTACAGTGGCTATGATGAATTAGTTGCTGAATTGGATCAGCTGTTTGAATTTGGGGGTGAATTATTGTCAACTAAAAAAGACTGGCTTATCGTCTATACTGATAATGAGGGTGATATGATGCTTGTAGGCGATGACCCATGGCAGGAATTCTGTGCCATGGTTCGCAAAATTTATATCTACCCTAAAGAGGAGATCCAGAGAATGAGCCCGGGTACCTTGAGTTCAAAGAATGAAGAGAACCAGCCGACTACGGCTGGTGAAGGTGCAGATGCAATAGATGTTAAATGTCAGCTGCACCAAAAGCTCAATTCAGAAAATTGCCTTGACGCCTAA 2340 0.4791 MASSEVTMNGNCLNHNDAGAAEPHSPSTAKDAEAALFRELWHACAGPLVTVPREKERVFYFPQGHIEQVEASTNQVADQHMPVYDLPPKILCRVINVQLKAEPDTDEVFAQVTLLPEPNQNENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSKQPPTQELVAKDLHANEWRFKHIFRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAILTGTIFTVYYKPRTSPAEFIVPYDQYMESLKNSYSIGMRFKMRFEGEEAPEQRFTGTIVGMEDSDPNRWRDSKWRCLKVRWDEISNTPRPERVSPWKIEPALAPPALNPLSMPRPKRPRSNAVPSSPDSSVLTREASSKASIDPSPANGFPRVLQGQEFSTLRGNFAEGNECDTAEKSVVWPPAAVDDEKIDVSTSRRYVSESWMSMGRSEPTYSDLLSGFGASGDPSHSSFMDQMSPAYSARKQSMDHEGKLHMPHPWPVMPSSLSLNILDSNTKGPAHGGDTTYQSRGNLRYSAFGEYPALHGHKVEHSHGKLMPPPPAPVTQYQSPCSRELMSKSVSVKTSEAVKPKDSDCMLFGFSLISGPTGPEPSLSQRNVSEPAGQMHLAPHQQRTSETEEKSDHSKGARPAVDLVHKKGIALGRSVDLAKYSGYDELVAELDQLFEFGGELLSTKKDWLIVYTDNEGDMMLVGDDPWQEFCAMVRKIYIYPKEEIQRMSPGTLSSKNEENQPTTAGEGADAIDVKCQLHQKLNSENCLDA 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0768 779 MobiDBLite consensus disorder prediction 738 753 - -
Aed10g0768 779 Gene3D - 274 344 - -
Aed10g0768 779 Gene3D - 649 738 - -
Aed10g0768 779 MobiDBLite consensus disorder prediction 363 385 - -
Aed10g0768 779 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 654 757 IPR044835 GO:0003677|GO:0006355|GO:0009725
Aed10g0768 779 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 16 200 IPR044835 GO:0003677|GO:0006355|GO:0009725
Aed10g0768 779 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 199 648 IPR044835 GO:0003677|GO:0006355|GO:0009725
Aed10g0768 779 MobiDBLite consensus disorder prediction 345 393 - -
Aed10g0768 779 SUPERFAMILY CAD & PB1 domains 657 726 - -
Aed10g0768 779 PANTHER AUXIN RESPONSE FACTOR 2 654 757 - -
Aed10g0768 779 PANTHER AUXIN RESPONSE FACTOR 2 199 648 - -
Aed10g0768 779 MobiDBLite consensus disorder prediction 622 649 - -
Aed10g0768 779 Pfam AUX/IAA family 690 734 IPR033389 -
Aed10g0768 779 SUPERFAMILY DNA-binding pseudobarrel domain 138 240 IPR015300 -
Aed10g0768 779 Gene3D - 139 224 IPR015300 -
Aed10g0768 779 MobiDBLite consensus disorder prediction 1 27 - -
Aed10g0768 779 Pfam Auxin response factor 237 319 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Aed10g0768 779 PANTHER AUXIN RESPONSE FACTOR 2 16 200 - -
Aed10g0768 779 CDD B3_DNA 140 208 IPR003340 GO:0003677
Aed10g0768 779 ProSiteProfiles PB1 domain profile. 649 731 IPR000270 GO:0005515
Aed10g0768 779 MobiDBLite consensus disorder prediction 738 757 - -
Aed10g0768 779 MobiDBLite consensus disorder prediction 632 649 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0768 Aed-Chr10 6310030 6315030 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0768 1 773 B3 DNA Binding Superfamily AT5G62000 59.722 0.0 966
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0768 - - gmx:100803498 1438.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0768 10 6310030 6315030 Aed10g0768 10 6310030 6315030 ECH
Aed5g2214 5 24196571 24201268 Aed10g0768 10 6310030 6315030 PCT
Aed10g0768 10 6310030 6315030 Aed6g1342 6 18118952 18120964 PCT