Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0757 ATGGAGGGAAGGTCATCACATTCTTCTGAATTAAGAGAAGATGAATATGATTTGTTCCCAATATATTCTGAAAGGTCTCAGCAAGACATGTCAGCCATGGTTTCTGCTCTCACACAAGTCATTGGTGGCTCCAATAATGAAGAAGACCTACGTTTAACTAATTCCTCACACAACAACAACACCTCAACCCAGAATATTAATAATGAATTACAATCCCAAGTATCTGCACAACAACAAGAACAAGTTAGAAGAAGACACTATAGAGGAGTGAGGCAGCGTCCATGGGGAAAGTGGGCTGCAGAGATTCGCGATCCAAAGAAAGCAGCAAGGGTATGGCTCGGAACTTTCGAAACCGCTGAAGCTGCAGCTCTTGCTTATGATGAAGCCGCTCTCAGATTCAAAGGAAGCAAAGCAAAGCTCAATTTCCCTGAAAGGGTTCAAGGCACTGGCGAATTTGGTAATTACCTCACAAATCAGCATCACATGTCAGCATCAAGCAGCATTGGTACTGAACAAGCTTCTAACCCTGTTGTTGTTGTTCCACACTTCACTACTACTCAAGAAACTTATTCACCAAGTCACTATGCACAACAACAACAATTTATGGGTGGTGGTGGGAGTAATAACAGCTTCAGTAACCAAGACAGTAATAACAATAATATGCTTCGTTTCTATGGGGGAGATCACATTTTTGTTTCTTCGTCTCAGCCATCTTCGTCTTCTTCTTCTAGTGGATTCATGTCTCAGCATCAGCAAGAAGAGTTTCTCAGATTTTCTATGCAATTTGGAGGCTCTTCTTCTGCTTCTGGGAATTGGAGGGGTACTGGACATTGA 834 0.4221 MEGRSSHSSELREDEYDLFPIYSERSQQDMSAMVSALTQVIGGSNNEEDLRLTNSSHNNNTSTQNINNELQSQVSAQQQEQVRRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAEAAALAYDEAALRFKGSKAKLNFPERVQGTGEFGNYLTNQHHMSASSSIGTEQASNPVVVVPHFTTTQETYSPSHYAQQQQFMGGGGSNNSFSNQDSNNNNMLRFYGGDHIFVSSSQPSSSSSSSGFMSQHQQEEFLRFSMQFGGSSSASGNWRGTGH 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0757 277 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 21 262 - -
Aed10g0757 277 SUPERFAMILY DNA-binding domain 86 144 IPR016177 GO:0003677
Aed10g0757 277 PRINTS Ethylene responsive element binding protein signature 109 125 IPR001471 GO:0003700|GO:0006355
Aed10g0757 277 PRINTS Ethylene responsive element binding protein signature 87 98 IPR001471 GO:0003700|GO:0006355
Aed10g0757 277 SMART rav1_2 86 149 IPR001471 GO:0003700|GO:0006355
Aed10g0757 277 Gene3D AP2/ERF domain 85 145 IPR036955 GO:0003700|GO:0006355
Aed10g0757 277 CDD AP2 86 144 IPR001471 GO:0003700|GO:0006355
Aed10g0757 277 PANTHER DNA-BINDING DOMAIN 21 262 IPR044808 GO:0003700|GO:0009873
Aed10g0757 277 ProSiteProfiles AP2/ERF domain profile. 86 143 IPR001471 GO:0003700|GO:0006355
Aed10g0757 277 Pfam AP2 domain 86 135 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0757 Aed-Chr10 6211199 6214110 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0757 17 159 AP2-EREBP Transcription Factor Family AT5G61890 64.828 3.70e-56 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aed10g0757 AP2 3.4e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0757 - - gmx:100787091 302.367
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0757 10 6211199 6214110 Aed5g2205 5 24114224 24115495 ECH
Aed10g0757 10 6211199 6214110 Aed10g0757 10 6211199 6214110 ECH
Aed5g2205 5 24114224 24115495 Aed10g0757 10 6211199 6214110 PCT