Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0734 ATGTCGAAGTCCAACAGTAACAGCGTTAGCCCGGCGTTACTGAAGCCGGCGTGGGTGCTGCCGTACAAGACGGAGAATATCCGGGAAGTGTACACGCTGGGGCGGAAGCTGGGGCAGGGGCAATTCGGGACAACCTTCCTCTGTACGCAGAACGCGACGGGGCGGACCTACGCCTGCAAGTCAATCCCGAAGCGGAAGCTTCTCTGCAAGGAGGACTACGACGACGTTTGGAGGGAGATTCAGATAATGCACCATCTCTCGGAGCACCCCAACGTGGTCCGCATCCACGGCACCTACGAGGACGCCTCGTCGGTCCACCTCGTCATGGAGCTCTGTGAGGGAGGGGAGCTTTTCGACCGGATTGTCAAGAAGGGCCACTACAGCGAGCGCCAGGCCGCGAAACTCATCAGAACCATTCTGGAGGTTGTTGAGGCTTGTCACTCTCTCGGCGTCATGCATAGGGACCTCAAGCCTGAGAACTTTCTCTTCGACACCGTCGACGAGGATGCTAAGCTCAAAACCACCGATTTCGGCCTCTCTGTCTTCTACAAGCCAGAAACTGAGCAGGGGATTTTCCGACAGATTTTGCTAGGAAGACTTGATTTCCAGTCTGAGCCATGGCCTAGCATTTCAGACAGTGCCAAAGATATAATCCGAAAAATGCTTGATCGGAATCCAAAAACTAGGCTCACGGCTCACAAAGTTCTCTGTCACCCATGGATTGTTGATGACAACATTGCACCAGATAAACCTCTTGATTCTGCTGTTTTATCACGCCTGAAGCAGTTCTCTGCAATGAATAAACTTAAAAAGATGGCTTTGCGTGTTATTGCAGAGAGGCTCTCCGAGGAAGAAATTGGTGGTCTGAAGGAATTATTCAGGATGATTGATGCAGATAACAGTGGAACTATAACATTCGATGAGCTAAAAGACGGCTTAAAGCGAGTAGGATCTGAACTAATGGAGTCTGAAATCAAGGATCTTATGGATGCAGCCGATATTGATAATAGTGGGACAATAGACTATGGCGAATTCATTGCCGCTACGGTCCACTTAAATAAGCTGGAGAGAGAGGAAAACCTGGTGTCAGCTTTCTCCTATTTTGACAAAGATGGAAGTGGTTACATAACCATTGACGAGATACAACAGGCTTGTAAGGAGTTCGGTTTGGAAGATGTCCATATTGATGAAATTGTCAAGGAAATTGATCAAGACAATGATGGACAAATAGATTATGGGGAATTTGCTGCCATGATGAGAAAGGGCAATGGAGGAATTGGCAGGCGAACCATGAGGAGCACGCTCAATTTCAGAGATGCTCTGGGGATTATAGACCATGGGTCTAATTAA 1350 0.4859 MSKSNSNSVSPALLKPAWVLPYKTENIREVYTLGRKLGQGQFGTTFLCTQNATGRTYACKSIPKRKLLCKEDYDDVWREIQIMHHLSEHPNVVRIHGTYEDASSVHLVMELCEGGELFDRIVKKGHYSERQAAKLIRTILEVVEACHSLGVMHRDLKPENFLFDTVDEDAKLKTTDFGLSVFYKPETEQGIFRQILLGRLDFQSEPWPSISDSAKDIIRKMLDRNPKTRLTAHKVLCHPWIVDDNIAPDKPLDSAVLSRLKQFSAMNKLKKMALRVIAERLSEEEIGGLKELFRMIDADNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDNSGTIDYGEFIAATVHLNKLEREENLVSAFSYFDKDGSGYITIDEIQQACKEFGLEDVHIDEIVKEIDQDNDGQIDYGEFAAMMRKGNGGIGRRTMRSTLNFRDALGIIDHGSN 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0734 449 Gene3D Phosphorylase Kinase; domain 1 33 117 - -
Aed10g0734 449 ProSiteProfiles Protein kinase domain profile. 31 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed10g0734 449 SMART efh_1 288 316 IPR002048 GO:0005509
Aed10g0734 449 SMART efh_1 324 352 IPR002048 GO:0005509
Aed10g0734 449 SMART efh_1 360 388 IPR002048 GO:0005509
Aed10g0734 449 SMART efh_1 394 422 IPR002048 GO:0005509
Aed10g0734 449 Gene3D Transferase(Phosphotransferase) domain 1 187 242 - -
Aed10g0734 449 ProSiteProfiles EF-hand calcium-binding domain profile. 394 425 IPR002048 GO:0005509
Aed10g0734 449 ProSitePatterns EF-hand calcium-binding domain. 369 381 IPR018247 -
Aed10g0734 449 ProSitePatterns Serine/Threonine protein kinases active-site signature. 151 163 IPR008271 GO:0004672|GO:0006468
Aed10g0734 449 ProSitePatterns EF-hand calcium-binding domain. 297 309 IPR018247 -
Aed10g0734 449 PANTHER CDPK-RELATED KINASE 7 185 - -
Aed10g0734 449 PANTHER CDPK-RELATED KINASE 186 432 - -
Aed10g0734 449 Pfam Protein kinase domain 31 187 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed10g0734 449 ProSitePatterns EF-hand calcium-binding domain. 333 345 IPR018247 -
Aed10g0734 449 CDD STKc_CAMK 30 240 - -
Aed10g0734 449 ProSitePatterns EF-hand calcium-binding domain. 403 415 IPR018247 -
Aed10g0734 449 ProSitePatterns Protein kinases ATP-binding region signature. 37 60 IPR017441 GO:0005524
Aed10g0734 449 ProSiteProfiles EF-hand calcium-binding domain profile. 284 319 IPR002048 GO:0005509
Aed10g0734 449 CDD EFh 289 348 IPR002048 GO:0005509
Aed10g0734 449 Gene3D Transferase(Phosphotransferase) domain 1 118 186 - -
Aed10g0734 449 Pfam EF-hand domain pair 359 420 IPR002048 GO:0005509
Aed10g0734 449 Pfam EF-hand domain pair 289 349 IPR002048 GO:0005509
Aed10g0734 449 ProSiteProfiles EF-hand calcium-binding domain profile. 356 391 IPR002048 GO:0005509
Aed10g0734 449 SUPERFAMILY EF-hand 280 421 IPR011992 -
Aed10g0734 449 Gene3D - 243 350 - -
Aed10g0734 449 SUPERFAMILY Protein kinase-like (PK-like) 4 264 IPR011009 -
Aed10g0734 449 PANTHER SERINE/THREONINE-PROTEIN KINASE 7 185 - -
Aed10g0734 449 PANTHER SERINE/THREONINE-PROTEIN KINASE 186 432 - -
Aed10g0734 449 ProSiteProfiles EF-hand calcium-binding domain profile. 320 355 IPR002048 GO:0005509
Aed10g0734 449 Gene3D - 354 449 - -
Aed10g0734 449 SMART serkin_6 31 241 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0734 Aed-Chr10 6046354 6051477 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0734 19 443 EF-hand Containing Proteins AT1G35670 69.958 0.0 682
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Aed10g0734 Pkinase 5.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0734 K13412 - gmx:100790443 827.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0734 10 6046354 6051477 Aed10g0734 10 6046354 6051477 ECH