Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0728 ATGGAGAAGGCACGATTTGGGTTTTTCTTCATGTTGCTCATTCTCCTTGCTTCTCAGATGATGGTGCAAACTACAGAGGGAAGAAGGCACTGTGAGTCAAAGAGCCATCGTTTTAAAGGGATGTGTCTCAGCCAGCATAACTGCGCTTCGGTTTGCCATCTTGAAGGTTTCACTGGTGGCAAGTGTCGTGGATTTCGTAGACGCTGTTTCTGCACCAAGCACTGTTAA 228 0.4693 MEKARFGFFFMLLILLASQMMVQTTEGRRHCESKSHRFKGMCLSQHNCASVCHLEGFTGGKCRGFRRRCFCTKHC 75
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0728 75 PANTHER DEFENSIN 1 75 - -
Aed10g0728 75 Gene3D - 29 75 IPR036574 -
Aed10g0728 75 PANTHER DEFENSIN-LIKE PROTEIN 1 1 75 - -
Aed10g0728 75 CDD Knot1 42 72 IPR003614 GO:0006952
Aed10g0728 75 ProSitePatterns Gamma-thionins family signature. 29 52 IPR008176 GO:0006952
Aed10g0728 75 SMART gth_4 30 75 IPR003614 GO:0006952
Aed10g0728 75 PRINTS Purothionin signature 30 45 IPR008176 GO:0006952
Aed10g0728 75 PRINTS Purothionin signature 60 74 IPR008176 GO:0006952
Aed10g0728 75 Pfam Gamma-thionin family 29 75 - -
Aed10g0728 75 SUPERFAMILY Scorpion toxin-like 29 75 IPR036574 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0728 Aed-Chr10 5967960 5968687 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0728 9 75 Plant Defensins Gene Families AT2G02130 62.687 3.03e-26 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0728 - - gmx:100788332 134.42