Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0726 ATGGATAAGTATGAGGCCGTTAAGGATTTGGGAGCTGGCAATTTTGGGGTGGCTAGGCTGATGAGGAACAAGGTCACCAAGGAGCTCGTAGCCATGAAATACATCGAGCGTGGCCCCAAGATTGACGAGAACGTGGCAAGGGAGATTATGAACCACAGGTCCCTTCGGCATCCCAATATAATTCGTTACAAGGAGGCAAGGAATTTAGTTTACTTCATTTATTTATTTAACATGTTGGATCACTTGGCTAGATATTTCTTTCAGCAGCTGATCTCTGGTGTCCATTTCTGTCATACCATGCAAATATGCCACAGAGATTTGAAGCTAGAAAATACCCTTCTAGATGGAAGTCCTGCACCCCGGTTGAAAATTTGTGACTTCGGTTATTCCAAGTCATCTTTGCTGCATTCGCGACCCAAATCAACTGTTGGAACACCGGCTTATATAGCACCAGAAGTTCTTTCTAGGCGAGAGTATGATGGAAAGTTGGCTGATGTATGGTCATGTGCGGTGACTCTTTATGTCATGCTGGTTGGAGCATATCCCTTTGAGGACCAGGATGACCCCAGGAATTTTAGGAAAACAATTCAGCGTATAATGGCTGTTCAGTACAAAATCCCTGATTATGTTCACATATCTCAAGATTGTAGACACCTCCTCTCTCGTATCTTTGTTGCAAATCCATTGAGGAGAATTACTATTAAGGAAATTAAGAACCACCCATGGTTTTTGAAGAATCTTCCAAGGGAGCTAACTGAATCAGCTCAAGCTATCTATTACCAGAGAGACAGCCCAAACTTTCACTTTCAAAGTGTCGACGAGCTAATGAAAATTGTGGGAGAGGCCAGAAATCCACCTCCAATATCTAGGCCTGTCAAAGGTTTTGGCTGGGAAGGTGAGGAAGATTTGGATGAAGAAGTGGAGGAGGAAGAGGAGGATGAAGAAGATGAGTATGATAAGAGGGTCAAAGAGGTTCATGCAAGTGGCGAATTCCAAATTAGTTAA 1005 0.4318 MDKYEAVKDLGAGNFGVARLMRNKVTKELVAMKYIERGPKIDENVAREIMNHRSLRHPNIIRYKEARNLVYFIYLFNMLDHLARYFFQQLISGVHFCHTMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCAVTLYVMLVGAYPFEDQDDPRNFRKTIQRIMAVQYKIPDYVHISQDCRHLLSRIFVANPLRRITIKEIKNHPWFLKNLPRELTESAQAIYYQRDSPNFHFQSVDELMKIVGEARNPPPISRPVKGFGWEGEEDLDEEVEEEEEDEEDEYDKRVKEVHASGEFQIS 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0726 334 Gene3D Phosphorylase Kinase; domain 1 1 75 - -
Aed10g0726 334 Gene3D Transferase(Phosphotransferase) domain 1 76 251 - -
Aed10g0726 334 SUPERFAMILY Protein kinase-like (PK-like) 2 278 IPR011009 -
Aed10g0726 334 Coils Coil 300 320 - -
Aed10g0726 334 ProSitePatterns Serine/Threonine protein kinases active-site signature. 102 114 IPR008271 GO:0004672|GO:0006468
Aed10g0726 334 PANTHER SERINE/THREONINE-PROTEIN KINASE SRK2H 2 66 - -
Aed10g0726 334 MobiDBLite consensus disorder prediction 299 318 - -
Aed10g0726 334 PANTHER SERINE/THREONINE KINASE 82 327 - -
Aed10g0726 334 MobiDBLite consensus disorder prediction 289 334 - -
Aed10g0726 334 ProSiteProfiles Protein kinase domain profile. 4 243 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed10g0726 334 SMART serkin_6 4 243 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed10g0726 334 PANTHER SERINE/THREONINE-PROTEIN KINASE SRK2H 82 327 - -
Aed10g0726 334 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Aed10g0726 334 Pfam Protein kinase domain 4 243 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed10g0726 334 PANTHER SERINE/THREONINE KINASE 2 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0726 Aed-Chr10 5951469 5954982 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0726 1 247 CBL-interacting serine-threonine protein kinases AT5G01810 40.511 3.06e-50 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Aed10g0726 Pkinase 3.2e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0726 K14498 - gmx:547811 582.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0726 10 5951469 5954982 Aed10g0726 10 5951469 5954982 ECH
Aed5g2183 5 23952343 23957096 Aed10g0726 10 5951469 5954982 PCT