Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0721 ATGCCGCTTTTGAAGAGAAAGCCTTTTGCCTTGCCTGAGCCACCCAATGATTTGGAGCCACACGAGAATTACCGCCAGAGGATTTGGGCATGCAAAATTACTGGAAAAACTGGCTTGACTTATGAAGAGGCTATGGTGTCAGAGAAGCACGGTACTGAGAAAGTTCAACAGATTCCGGAAGAATTTGTGGTACCTGCTCTAAGGATTATTCAGTACAGCGGTTCTGACATTTGGTCATATAATGCTATACTTCAAATGAAGGAGTTTGCTAAATTTATCTTATGCATGCTCCCTTTGAAGGATCTTGCTGATTCTATTGCTCAAAAGTTGCAGGAGCAGTTGTTTGTGGGTGCTCAAATGTATGGAAAAAAGAATGACAAAGTACATCCATGTAAAATATTGAAAGTGATGCAGGAAGATGCTGAAAATGTCTGCTACGTGGTAGCTTGGCTTGATGAAAACAATAGAATTATTGAAAGAGAAGAAGTCAGCTCTCAAGATTTTGTACAGAAGAGGCCACCTCTTAGTAGAAATATTTTGAAGTCTTTCATCCGTGAATCTACATATCGAAATGCTCCTTGGGTTTTACATGATAAACTGGCAAACAAACATGGAATCTCAACTGATGTTCCAGAGGAGTTAAGAGGAAAGGTTTTCTTCAACAATGGGCTTGTGGTATGCACCAAAAAAAGAAAAAAACAGGAAGAGTCAATCAAATATCCAATTGATGATCTTTTAGTGAAGCCTAGTCCAGATGATCCTGTTTTCAGTAGTCGTCCTTCTCCATCAAGAGACTTTAATGTTCCAATTTATTGTGTAGGGGATCTTGTAATGGTTTGGGATTTTTTTATGTGTTTTGGTGAACTCTTACTATTGTGGCCTTACTCTCTCAAAGATTTTGAAAATGCAATTAGCCACAGGGATGGCAATGTTGGTCTTATAGTGGAATCTCATGCAGTACTCTTTCGCGTGCTCATCAAAGGCGATGATGAATACTCTGCAGCTGTTCAGGAAAAAATACGGAAGAAGATTACAATGATTAGTTGGAAAGACTATTTATGTGATTTTCTAGAAATGATCAATATTCCCAAGCTGCGGAAATATGAAGCAACCATTAAACGGGGAGATTATGGTTATGTAGATGTCAATGCTAAATTAGAAATATTTCACGAATTAGTCAATAGAGCCCTTGAAACTGCTCTTGTCAGGGAAAAATTGGATGAGTTTATTGAACAGAGGCAGTTACTGGGGGCTGCTAAAAGGGAAGAAGCAATTGAAGCTGCTGTGAAGAGAAGAAAAGAAAAGGAGCAGTTGAAAGCTGATTCTGAAAGTAAGCGTGGTGAGAATGGGCATCATCTTGGTCATGATGCAAGTGGGTCAACAAATAATAATCACAGAATACAGAATGGTGACATTGGAAAGAATAGAAATGGAGCGACAGATTCATCTAGGCAAAGAGATGCATTGGATAGCAGTGGGATCAAGCATTCAATCCTTGGTTCAAAAATGAATGGAACAGCAGAAATTGGAAAAGTATCCAGAAAGGAATCAGAGAAAAGTAAAGAACAGAGGGGAGAATATTTTGATCGGAAGATGGAGAAATGGTGTATTCGTACTAGTCCGTTAGGTAAGGATAGACATTATAATAGGTATTGGTGGTTTCACCGTGATGAGAGGATATTCGTTGAAAGTTCTGACTCCAAGGAGTGGGGTTACTACAGTAGCAAGGAAGAGCTTGATGCATTGATGGGTTCACTGAATTGCAAAGGCGAAAGGGAAAGGGCACTGCATAAACAACTGGAAAAATATTATAGTAGAATATGCTCAAAACTGCAGAAAAGTTCAAAGGACTTGGTGCATAAGATTACCCGAGATGACTCTAAGGTCCGAAGGTCTAGTCGTGTTCGGGCTCCACCTAGGGAAAATCCTGCCAAAGCTTTCCTCAAATATGCCAATAAGTGGAAAGAAGAGTAA 1974 0.3946 MPLLKRKPFALPEPPNDLEPHENYRQRIWACKITGKTGLTYEEAMVSEKHGTEKVQQIPEEFVVPALRIIQYSGSDIWSYNAILQMKEFAKFILCMLPLKDLADSIAQKLQEQLFVGAQMYGKKNDKVHPCKILKVMQEDAENVCYVVAWLDENNRIIEREEVSSQDFVQKRPPLSRNILKSFIRESTYRNAPWVLHDKLANKHGISTDVPEELRGKVFFNNGLVVCTKKRKKQEESIKYPIDDLLVKPSPDDPVFSSRPSPSRDFNVPIYCVGDLVMVWDFFMCFGELLLLWPYSLKDFENAISHRDGNVGLIVESHAVLFRVLIKGDDEYSAAVQEKIRKKITMISWKDYLCDFLEMINIPKLRKYEATIKRGDYGYVDVNAKLEIFHELVNRALETALVREKLDEFIEQRQLLGAAKREEAIEAAVKRRKEKEQLKADSESKRGENGHHLGHDASGSTNNNHRIQNGDIGKNRNGATDSSRQRDALDSSGIKHSILGSKMNGTAEIGKVSRKESEKSKEQRGEYFDRKMEKWCIRTSPLGKDRHYNRYWWFHRDERIFVESSDSKEWGYYSSKEELDALMGSLNCKGERERALHKQLEKYYSRICSKLQKSSKDLVHKITRDDSKVRRSSRVRAPPRENPAKAFLKYANKWKEE 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0721 657 MobiDBLite consensus disorder prediction 455 479 - -
Aed10g0721 657 Pfam ATP-utilising chromatin assembly and remodelling N-terminal 22 73 IPR013136 -
Aed10g0721 657 Coils Coil 421 445 - -
Aed10g0721 657 ProSiteProfiles WAC domain profile. 1 127 IPR013136 -
Aed10g0721 657 MobiDBLite consensus disorder prediction 431 525 - -
Aed10g0721 657 ProSiteProfiles DDT domain profile. 270 331 IPR018501 -
Aed10g0721 657 PANTHER BROMODOMAIN ADJACENT TO ZINC FINGER DOMAIN, 2A 1 655 - -
Aed10g0721 657 Pfam DDT domain 272 327 IPR018501 -
Aed10g0721 657 MobiDBLite consensus disorder prediction 509 525 - -
Aed10g0721 657 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 537 603 IPR028941 -
Aed10g0721 657 SMART testlast3 270 331 IPR018501 -
Aed10g0721 657 MobiDBLite consensus disorder prediction 431 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0721 Aed-Chr10 5905354 5910440 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0721 375 614 Homeobox Transcription Factor Family AT5G44180 26.136 8.29e-09 57.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Aed10g0721 WSD 4.3e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0721 - - gmx:100784607 1016.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0721 10 5905354 5910440 Aed10g0721 10 5905354 5910440 ECH
Aed5g2179 5 23927226 23933561 Aed10g0721 10 5905354 5910440 PCT