Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0718 ATGGCCGCAGAAGTTTGTGGCGCGTCTCTATTCTTATCCGTTAAAACTCAACTGCAACTTCAACTGCAGCAACGCCACCACCAAAACGTGTTATTCCATGCTCAACGAAGCAGAACGCGAAGAAGCGCTACCAGATTCAACTCATCCAAACGCTGCTTTAGTTCCGCCTTTCCAAATGCGTCCGCGCTTCGCCGCGGCGTCGCGTGCCAGGTCGCCAGCACCGACTTCGAATCCGCCGCGAAAGCCGGCGAGGATCGTCTAACTAAGGTGCCGGTGCGTAATATAAGGAACTTCTCCATCATTGCGCATATTGACCACGGGAAATCCACGTTGGCGGATAAGTTGCTTCAGGTGACTGGTACGGTGCAACAGCGAGAGATGAAGGATCAGTTTCTCGATAACATGGACTTGGAGAGAGAAAGAGGCATCACTATTAAGCTCCAGGCAGCCCGAATGCGTTATGTGTTTGAAAATGAACCTTATTGCTTGAATCTGATAGATACTCCGGGGCATGTCGACTTCTCGTATGAGGTTTCTCGGTCACTCGCTGCATGTGAGGGTGCTCTTCTAGTAGTAGATGCTTCTCAGGGCGTTGAAGCACAAACACTGGCTAATGTTTATTTGGCTTTGGAGAACAACCTAGAAATTATCCTTGTCTTGAACAAAATAGATCTCCCAGGTGCAGAACCAGATCGAGTTATCAAGGAGATTGAAGAGATTATAGGTCTAGATTGTAGCAATGCGATTCTCTGCTCTGCAAAGGAAGGAATAGGTATAATTGATATTCTCAATGCAATTGTTGCAAGAATTCCCCCACCTGAAGATACATCTAAAAGACCACTGAGGGCTTTAATATTTGACAGCTACTATGATCCATACAGAGGTGTTATTGTATATTTTCGAGTTGTAGACGGGACTATAAAGAAAGGTGACAGAGTTTATTTTATGGCTAGTGGGAAGGATTATTTTGCTGATGAAATTGGAGTTTTATCTCCCAGTCAACTACAAGTTGAAGAACTGTATGCTGGTGAGGTGGGCTATCTATCTGCATCAATAAGAACAGTAGCCGATGCCAGAGTGGGTGACACTATTACTCACTACAGCAGAAAGGCTGACAATTCACTCCCTGGATACGAGGAAGCCACTCCTATGGTGTTCTGTGGCTTGTTTCCTGTTGATGCTGACCAATTTCCTGATCTGCGTGATGCACTTGAGAAGCTACAACTCAATGATGCTGCACTTAAGTTTGAACCTGAGACATCGAGTGCCATGGGATTTGGCTTTAGATGTGGGTTTCTAGGCCTTCTTCATATGGAAATTGTTCAGGAGCGACTTGAGAGAGAATACAATTTGAGCCTGATAACAACTGCTCCAAGTGTTGTGTACAGAGTAAATTGTGTAAATGGTGATACTGTTGAATGCTCAAATCCATCTTTACTTCCTGAGCCTGGAAAAAGGAAATCAATTGAGGAGCCAATTGTTAAGATTGAGTTGCTTACACCAAAGGATTACATTGGCTCACTTATGGAACTGGCACAAGATAGAAGAGGGCAGTTCAAAGAAATGAAATTTATTGCTGAAAATAGGGCATCAATCACCTATGAATTACCATTAGCAGAGATGGTTGGTGATTTCTTTGATCAGTTGAAGTCAAGAAGTAAGGGTTATGCTAGTATGGAGTATACCTTTGTCGGGTACACGGAAAGTAATTTAATTAAACTTGACATACGAATAAATGGTGACTCTGTGGAGCCATTAGCTACAATTGTGCACAATGATAAGGCATATTCGGTGGGAAGGGCTTTGACTCTAAAGTTGAAGGAGCTTATACCACGACAAATGTTTAAAGTACCAATTCAAGCGTGCATAGGATCAAAAGTGATTGCTAGTGAAGCGATATCTGCAATAAGGAAGGATGTATTAGCCAAATGCTACGGTGGGGATATTACAAGAAAAAAGAAATTGCTTAAGAAACAGGCTGAAGGAAAGAAAAGGATGAAGTCTATTGGTAAAGTTGATGTGCCCCAAGAAGCTTTCATGGCCGTTTTGAAACTTGAAAAGGAGGTAATATGA 2073 0.4303 MAAEVCGASLFLSVKTQLQLQLQQRHHQNVLFHAQRSRTRRSATRFNSSKRCFSSAFPNASALRRGVACQVASTDFESAAKAGEDRLTKVPVRNIRNFSIIAHIDHGKSTLADKLLQVTGTVQQREMKDQFLDNMDLERERGITIKLQAARMRYVFENEPYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIILVLNKIDLPGAEPDRVIKEIEEIIGLDCSNAILCSAKEGIGIIDILNAIVARIPPPEDTSKRPLRALIFDSYYDPYRGVIVYFRVVDGTIKKGDRVYFMASGKDYFADEIGVLSPSQLQVEELYAGEVGYLSASIRTVADARVGDTITHYSRKADNSLPGYEEATPMVFCGLFPVDADQFPDLRDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGLLHMEIVQERLEREYNLSLITTAPSVVYRVNCVNGDTVECSNPSLLPEPGKRKSIEEPIVKIELLTPKDYIGSLMELAQDRRGQFKEMKFIAENRASITYELPLAEMVGDFFDQLKSRSKGYASMEYTFVGYTESNLIKLDIRINGDSVEPLATIVHNDKAYSVGRALTLKLKELIPRQMFKVPIQACIGSKVIASEAISAIRKDVLAKCYGGDITRKKKLLKKQAEGKKRMKSIGKVDVPQEAFMAVLKLEKEVI 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0718 690 Gene3D - 92 275 IPR027417 -
Aed10g0718 690 Pfam Elongation factor G C-terminus 489 574 IPR000640 -
Aed10g0718 690 CDD EF4_II 281 366 - -
Aed10g0718 690 Gene3D - 458 569 - -
Aed10g0718 690 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 133 148 IPR031157 -
Aed10g0718 690 SUPERFAMILY EF-G C-terminal domain-like 382 460 IPR035647 -
Aed10g0718 690 TIGRFAM small_GTP: small GTP-binding protein domain 96 265 IPR005225 GO:0005525
Aed10g0718 690 PANTHER TRANSLATION FACTOR GUF1-RELATED 82 684 IPR006297 GO:0005525
Aed10g0718 690 TIGRFAM lepA: elongation factor 4 94 685 IPR006297 GO:0005525
Aed10g0718 690 Hamap Elongation factor 4 [lepA]. 88 688 IPR006297 GO:0005525
Aed10g0718 690 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 91 298 IPR027417 -
Aed10g0718 690 Gene3D Translation factors 276 375 - -
Aed10g0718 690 Gene3D - 570 644 IPR038363 -
Aed10g0718 690 SUPERFAMILY Translation proteins 272 377 IPR009000 -
Aed10g0718 690 CDD EF4_III 383 458 - -
Aed10g0718 690 Gene3D Elongation Factor G (Translational Gtpase), domain 3 376 457 - -
Aed10g0718 690 SMART EFG_C_a 488 576 IPR000640 -
Aed10g0718 690 PANTHER TRANSLATION FACTOR GUF1, MITOCHONDRIAL 82 684 - -
Aed10g0718 690 Pfam GTP-binding protein LepA C-terminus 578 684 IPR013842 -
Aed10g0718 690 Pfam Elongation factor Tu GTP binding domain 94 271 IPR000795 GO:0003924|GO:0005525
Aed10g0718 690 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 93 274 IPR000795 GO:0003924|GO:0005525
Aed10g0718 690 CDD LepA 96 273 - -
Aed10g0718 690 Hamap Translation factor GUF1 homolog, organellar chromatophore [lepA]. 87 687 IPR027518 -
Aed10g0718 690 PRINTS GTP-binding elongation factor signature 97 110 IPR000795 GO:0003924|GO:0005525
Aed10g0718 690 PRINTS GTP-binding elongation factor signature 164 174 IPR000795 GO:0003924|GO:0005525
Aed10g0718 690 PRINTS GTP-binding elongation factor signature 180 191 IPR000795 GO:0003924|GO:0005525
Aed10g0718 690 PRINTS GTP-binding elongation factor signature 140 148 IPR000795 GO:0003924|GO:0005525
Aed10g0718 690 PRINTS GTP-binding elongation factor signature 216 225 IPR000795 GO:0003924|GO:0005525
Aed10g0718 690 CDD lepA_C 491 570 IPR035654 -
Aed10g0718 690 Pfam Elongation factor Tu domain 2 295 365 IPR004161 GO:0005525
Aed10g0718 690 SUPERFAMILY EF-G C-terminal domain-like 489 583 IPR035647 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0718 Aed-Chr10 5873635 5883563 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0718 93 336 Eukaryotic Initiation Factors Gene Family AT3G22980 33.852 5.28e-26 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0718 K21594 - gmx:100809693 1257.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0718 10 5873635 5883563 Aed10g0718 10 5873635 5883563 ECH