Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0669 ATGGAAGATGGAAGCTGCTTCAACCTTCCTCCTGGGTTTCTCTTCTCTCCAAGTGATGAAGAACTTGTTCTTCACTTTCTCTATTCTAAGGCTTCTCTTATTCCATGCCATCCCAACATCATCCCCGATCTCGATCCCTCCACTCACCTTCATCCTTGCCAACTAAATGGTACGGCGTTGTTAAGTGGTAATCAATACTATTTCTTTACCAAAGTGAACGAAAACAGAACCATAGAAAATGGGTGTTGGAAGGAAATAGGTGTAACAGAACCTATATTGTCAACCTTTGATAAGAAAGTAGGAATGAAGAAGTACTTGGTATTCCACGTTGGCGAATCTCCAACCAGTTGGGTAATGCAAGAATATCATATATGTTCCTCTGGGTTTGACGAAACTGCATCGTATGGAAGTGCTAGGAAAAGAGAGAAACATGATCAAAGTTGGAGCAAGTGGGTTTTGTGCAGAGTTTATGAGAAGGGCAGGTCTCAAGTACAAGATGAAGGTGTAGATTGCTATTATAGAGATGATGATGATGGCAGTGGATCAGAGCTTTCGTGGCTAGACCAAGTTTATCTGTCGTTGGATGATGATCTGGAAGAATTTGCCATGTCTATTAATTAG 621 0.4122 MEDGSCFNLPPGFLFSPSDEELVLHFLYSKASLIPCHPNIIPDLDPSTHLHPCQLNGTALLSGNQYYFFTKVNENRTIENGCWKEIGVTEPILSTFDKKVGMKKYLVFHVGESPTSWVMQEYHICSSGFDETASYGSARKREKHDQSWSKWVLCRVYEKGRSQVQDEGVDCYYRDDDDGSGSELSWLDQVYLSLDDDLEEFAMSIN 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0669 206 PANTHER NAC TRANSCRIPTION FACTOR 56 1 202 - -
Aed10g0669 206 Gene3D NAC domain 18 163 IPR036093 GO:0003677|GO:0006355
Aed10g0669 206 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 1 202 - -
Aed10g0669 206 Pfam No apical meristem (NAM) protein 10 124 IPR003441 GO:0003677|GO:0006355
Aed10g0669 206 SUPERFAMILY NAC domain 7 159 IPR036093 GO:0003677|GO:0006355
Aed10g0669 206 ProSiteProfiles NAC domain profile. 9 159 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0669 Aed-Chr10 5412087 5412961 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0669 8 163 NAC Transcription Factor Family AT1G61110 36.310 8.77e-29 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Aed10g0669 NAM 8.9e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0669 - - gmx:100170711 323.939