Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aed10g0649 | ATGATGATAGAGTCTAGGTTTTTGGTGATTTATTTGTTTTTGTTAATTCAGAGAAGACTGCTTTTGTTGAAAAGAAGCATTACGGTTTGGGCAAGTCAAATGAGTGGAAGTGGCAAAAAGCGCTCTTCAAAGTGGGATTTGAGAGACAATCCTGATTTTTCACCTGATGATAGTAAGCAATTTCGGTCTGGGTGGTCCTCTGCAGGTGATAAATTAAAGCCTGGCATGGGATTTTCATCCAAGGAACCTTTTTCTGGAGGCAGAGGTTCAAATAAGGACAATATTATGAATAAAGACTATCGAGATTTGGATGCAACAATGGAATGGGACGAGGATGAAAGTTACGACAATAAAATGTCTCCTGGGTTGGAGGGATGGAAACATAAGAGACATAGTCAATCCCCCAAAAATGGTTGGAGCAGGTCAGCCAGGAGTAGTCGAAGCAGGAGCCCTCCTCATGGTCTTAGGTGGGATTCAGGATTGAACGACAGAAATAGAATGCGGGCTGGAGGATCAACACAACCATGTAGAGATTTTTCTGCTGGTAAATGCAGAAGAGGCAGCCACTGCCATTTTCTTCATCATGATAATCAAATTCATGAGGATAGTTGGGAAGATAAGTACAGGGAAGATGAAGCCCCCAGATATTCTGCTCCCCATGAGGGTAGAGACTATTCTCTTAAGAGTGGTAGATCTAATGAAGCTTGTATGAATTTTGCAAAAGGCAGGTGCAGAAATGGACCGTCATGCAAGTTTGTGCATCATAACAATTCTGATGGACACAATAAAGTTTCTGTGGATGAATTAACTAGAGAGAGGGAAATTGATAGAAGGCACAGAGACAATTCTTTTGAGCAGGGTGGCGGGCATGGACCAAACCGTAGTGGTGATACGCTTTGCAAATTTTTTGCTAATGGAAATTGTCGTAATGGTAAATATTGTAGGTTTTCTCATGATAGGCAAGCATGTAGGAGCCCTAATAGAAGATTAAGAGATGATAGGTGGGGAAGCAATCCTGGGGGAGATTATCATATGCTGGATAGACAGAAATTGAGTGATTCAGTTAGTCCTAATAGGAGACCAAGGGATGGTAGGTGGGGTTCAGATGGTAACAAGGCTGATGCAGATAAAGTTTGGGACAGTCCAAAGCGGAATGATATAGTTCCTGTCTCTGATACAGCAAAGCTGGTTGAGGACAAAAGTGAAAACGTGGGTGCTGCAGAGCAAGGATTCACTCCCTTGCCTACGAGGGATGGATGGGGTCATAGTCTGGATAAGAGCAGAGTGCATGGTGAACAGCCATTTTCAAGTGATAAGAAGGAAGCTGATAGTTGGATAGCAGGAAATACTGCTGCCAACATGCACAGTTCCCAGTCAATAGGTACAGACATTTGGTTGGGTGATGATGCAAAAATGTCTCCTGATTGGGATTACAGGGTGAGATCTTCCGGTTGTATTGAAGAAAAGCATGAACAAAATAAGCATGGGATAACACAGGGTTTTATGTATTTAGCCTCCTCTGAACAGGACAGAATACAAATTGCTCCAGGACAAGGTTTTAATCAGAATGTGGAGAGTTTGAATCCTTTGCATTCTTCAAGCTGCCAAGCTGTTGGACAAAGTCAAGTAGCAGTTCCCATTCTACCTCCGAAGAGTGGAATTGATGGTATGCTGAACCAGGAAGTCTCTATTGATAATAAGTACACTGCTGAGCCAAATATCATGGATGCAGGCTTATCCCAAGTTAGTTCAAGAAATCCTCCTCCAACTGAGAACGTGGTAGGCAAAGAACAGCTTGCTCAGCTTACCAATCTCTCAGCCTCGCTGGCTCATATCCTTGGGACAGGGCAACAGCTGCCACAACTTTATGCTGCTTTAAATTCTCACGATGCAAAGGACACATCCTCCCCAGCAAAAATTGAGGTGCCTGCTATGCATGTTTCCAATACATTCATCAGGCCAGATCCTGCGGTTGGACTTCTGAAGCAGTATGATCCAATGAGTGACAGTGTTGAGCCAAAGAGTGCTATTGCAAGTGGGGTGCCCCCAGCCATTCCTCCAAGTAAAAAAGCTGCTGAAGATGTAGTGGAAATTCTGTCACAGTTGTCCAACACAGCAAGACAAAATTGTGGGGATACTTCCAAGGCTGCTGGCTCAGAAGAACTTGTCAAGAGTGATCCTCTAATCCAGTTGCAGCCAGGTATAGTTTCTAGTCTGTTCTGCCGATCTGTTTGCAACAGGGAGAACTAA | 2250 | 0.436 | MMIESRFLVIYLFLLIQRRLLLLKRSITVWASQMSGSGKKRSSKWDLRDNPDFSPDDSKQFRSGWSSAGDKLKPGMGFSSKEPFSGGRGSNKDNIMNKDYRDLDATMEWDEDESYDNKMSPGLEGWKHKRHSQSPKNGWSRSARSSRSRSPPHGLRWDSGLNDRNRMRAGGSTQPCRDFSAGKCRRGSHCHFLHHDNQIHEDSWEDKYREDEAPRYSAPHEGRDYSLKSGRSNEACMNFAKGRCRNGPSCKFVHHNNSDGHNKVSVDELTREREIDRRHRDNSFEQGGGHGPNRSGDTLCKFFANGNCRNGKYCRFSHDRQACRSPNRRLRDDRWGSNPGGDYHMLDRQKLSDSVSPNRRPRDGRWGSDGNKADADKVWDSPKRNDIVPVSDTAKLVEDKSENVGAAEQGFTPLPTRDGWGHSLDKSRVHGEQPFSSDKKEADSWIAGNTAANMHSSQSIGTDIWLGDDAKMSPDWDYRVRSSGCIEEKHEQNKHGITQGFMYLASSEQDRIQIAPGQGFNQNVESLNPLHSSSCQAVGQSQVAVPILPPKSGIDGMLNQEVSIDNKYTAEPNIMDAGLSQVSSRNPPPTENVVGKEQLAQLTNLSASLAHILGTGQQLPQLYAALNSHDAKDTSSPAKIEVPAMHVSNTFIRPDPAVGLLKQYDPMSDSVEPKSAIASGVPPAIPPSKKAAEDVVEILSQLSNTARQNCGDTSKAAGSEELVKSDPLIQLQPGIVSSLFCRSVCNREN | 749 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aed10g0649 | 749 | MobiDBLite | consensus disorder prediction | 256 | 296 | - | - | |
Aed10g0649 | 749 | MobiDBLite | consensus disorder prediction | 112 | 175 | - | - | |
Aed10g0649 | 749 | MobiDBLite | consensus disorder prediction | 36 | 96 | - | - | |
Aed10g0649 | 749 | Gene3D | - | 290 | 349 | - | - | |
Aed10g0649 | 749 | MobiDBLite | consensus disorder prediction | 112 | 131 | - | - | |
Aed10g0649 | 749 | MobiDBLite | consensus disorder prediction | 41 | 56 | - | - | |
Aed10g0649 | 749 | SMART | c3hfinal6 | 294 | 320 | IPR000571 | GO:0046872 | |
Aed10g0649 | 749 | SMART | c3hfinal6 | 170 | 196 | IPR000571 | GO:0046872 | |
Aed10g0649 | 749 | SMART | c3hfinal6 | 231 | 256 | IPR000571 | GO:0046872 | |
Aed10g0649 | 749 | MobiDBLite | consensus disorder prediction | 256 | 285 | - | - | |
Aed10g0649 | 749 | ProSiteProfiles | Zinc finger C3H1-type profile. | 230 | 257 | IPR000571 | GO:0046872 | |
Aed10g0649 | 749 | MobiDBLite | consensus disorder prediction | 398 | 420 | - | - | |
Aed10g0649 | 749 | Gene3D | - | 167 | 269 | - | - | |
Aed10g0649 | 749 | ProSiteProfiles | Zinc finger C3H1-type profile. | 294 | 321 | IPR000571 | GO:0046872 | |
Aed10g0649 | 749 | PANTHER | PROTEIN FRIGIDA-ESSENTIAL 1 | 34 | 734 | - | - | |
Aed10g0649 | 749 | ProSiteProfiles | Zinc finger C3H1-type profile. | 170 | 197 | IPR000571 | GO:0046872 | |
Aed10g0649 | 749 | SUPERFAMILY | CCCH zinc finger | 296 | 319 | IPR036855 | GO:0046872 | |
Aed10g0649 | 749 | MobiDBLite | consensus disorder prediction | 325 | 386 | - | - | |
Aed10g0649 | 749 | Pfam | CCCH-type zinc finger | 299 | 319 | IPR041367 | - | |
Aed10g0649 | 749 | MobiDBLite | consensus disorder prediction | 346 | 383 | - | - | |
Aed10g0649 | 749 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 234 | 255 | IPR000571 | GO:0046872 | |
Aed10g0649 | 749 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 173 | 195 | IPR000571 | GO:0046872 | |
Aed10g0649 | 749 | PANTHER | ZINC FINGER CCCH DOMAIN PROTEIN-RELATED | 34 | 734 | - | - |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C3H | Aed10g0649 | zf-CCCH | 4.2e-05 | CL0537 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aed10g0649 | - | K22909 | gmx:100783856 | 1296.18 |